Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
LIMK2P53671 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LIMK2P53671 CR848007.1-201ENST00000442354 1699 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LIMK2P53671 UBE2L2-201ENST00000254302 429 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 RNU6-884P-201ENST00000363889 107 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 RNY1P12-201ENST00000364251 105 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 Y_RNA.381-201ENST00000365666 102 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 RNU6-39P-201ENST00000384344 107 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 RNA5SP210-201ENST00000391034 120 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 RNU6-817P-201ENST00000391083 104 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LIMK2P53671 FGF7P8-201ENST00000402994 292 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 RNU2-36P-201ENST00000410361 191 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK2P53671 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.63□□□□□ -1.99
LIMK2P53671 AL109913.1-201ENST00000421173 514 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AC137499.1-201ENST00000427602 88 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 GPR143P-201ENST00000434155 205 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK2P53671 NEFMP1-201ENST00000443423 1006 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.63□□□□□ -1.99
LIMK2P53671 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK2P53671 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.63□□□□□ -1.99
LIMK2P53671 FDX1P2-201ENST00000450769 375 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 CECR9-201ENST00000453421 199 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 RPS29P25-201ENST00000481709 171 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK2P53671 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK2P53671 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK2P53671 SUB1P1-201ENST00000524415 382 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 MTND1P35-201ENST00000526739 508 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AL359212.1-201ENST00000556608 614 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK2P53671 MIR3670-2-201ENST00000582974 65 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 MIR3670-1-201ENST00000584160 65 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 MIR3670-3-201ENST00000584855 65 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AC008536.2-201ENST00000607284 349 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AC093788.1-201ENST00000609356 927 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LIMK2P53671 MIR3670-4-201ENST00000612260 65 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.63□□□□□ -1.99
LIMK2P53671 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.63□□□□□ -1.99
LIMK2P53671 DUXAP9-208ENST00000622815 614 ntBASIC2.63□□□□□ -1.99
LIMK2P53671 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.63□□□□□ -1.99
LIMK2P53671 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.63□□□□□ -1.99
LIMK2P53671 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LIMK2P53671 RNU6-1120P-201ENST00000362988 108 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RNU6-1097P-201ENST00000363586 107 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 Y_RNA.295-201ENST00000364918 102 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RNU5E-4P-201ENST00000364931 120 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RNU5E-6P-201ENST00000365574 115 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RNU6-74P-201ENST00000384235 107 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 Y_RNA.481-201ENST00000384373 102 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RNU6-14P-201ENST00000384630 106 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 Y_RNA.573-201ENST00000384763 105 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RNA5SP354-201ENST00000391247 136 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RNU6-908P-201ENST00000410160 94 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.62□□□□□ -1.99
LIMK2P53671 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK2P53671 GPM6BP2-201ENST00000432046 144 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RPL7P54-201ENST00000438336 674 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 HMGB3P12-201ENST00000438745 556 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 MTCO3P18-201ENST00000440206 761 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK2P53671 UBBP3-201ENST00000445497 241 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 GPM6BP1-201ENST00000446387 144 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 DPPA3P1-201ENST00000448050 469 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 FABP5P15-201ENST00000453566 214 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AP000705.1-201ENST00000454567 350 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RPL26P9-201ENST00000457466 433 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK2P53671 MRPS17P3-201ENST00000465453 385 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.62□□□□□ -1.99
LIMK2P53671 RPL36AP51-201ENST00000487216 318 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AC009901.1-201ENST00000506703 541 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 TBCAP3-201ENST00000512475 312 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AC096725.1-201ENST00000514266 313 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RNU6-1281P-201ENST00000516223 105 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RNU6-1092P-201ENST00000516955 87 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK2P53671 AC004486.1-201ENST00000546846 233 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK2P53671 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK2P53671 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.62□□□□□ -1.99
LIMK2P53671 AC007621.1-201ENST00000604544 437 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 Z84480.1-201ENST00000605131 311 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 RPL23AP88-201ENST00000605759 454 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.62□□□□□ -1.99
LIMK2P53671 AC092608.2-201ENST00000624427 218 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 AL008636.1-201ENST00000625038 1018 ntBASIC2.62□□□□□ -1.99
LIMK2P53671 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LIMK2P53671 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LIMK2P53671 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LIMK2P53671 ZNF680P1-201ENST00000436625 1469 ntBASIC2.61□□□□□ -1.99
LIMK2P53671 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LIMK2P53671 HSPE1P11-201ENST00000339579 310 ntBASIC2.61□□□□□ -1.99
LIMK2P53671 Y_RNA.22-201ENST00000362492 102 ntBASIC2.61□□□□□ -1.99
LIMK2P53671 Y_RNA.38-201ENST00000362617 102 ntBASIC2.61□□□□□ -1.99
LIMK2P53671 VTRNA1-1-201ENST00000363120 99 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms