Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 Y_RNA.295-201ENST00000364918 102 ntBASIC3.41□□□□□ -1.86
NEK3P51956 RNU6-487P-201ENST00000365430 104 ntBASIC3.41□□□□□ -1.86
NEK3P51956 MIR147B-201ENST00000390185 80 ntBASIC3.41□□□□□ -1.86
NEK3P51956 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
NEK3P51956 RNA5SP120-201ENST00000410900 112 ntBASIC3.41□□□□□ -1.86
NEK3P51956 OR9R1P-201ENST00000412200 877 ntBASIC3.41□□□□□ -1.86
NEK3P51956 AL096701.2-201ENST00000416920 238 ntBASIC3.41□□□□□ -1.86
NEK3P51956 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.41□□□□□ -1.86
NEK3P51956 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.41□□□□□ -1.86
NEK3P51956 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.41□□□□□ -1.86
NEK3P51956 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.41□□□□□ -1.86
NEK3P51956 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
NEK3P51956 RN7SL807P-201ENST00000470923 297 ntBASIC3.41□□□□□ -1.86
NEK3P51956 RPL21P93-201ENST00000480465 489 ntBASIC3.41□□□□□ -1.86
NEK3P51956 MRPL42P6-201ENST00000486397 371 ntBASIC3.41□□□□□ -1.86
NEK3P51956 SNORA14.1-201ENST00000516113 141 ntBASIC3.41□□□□□ -1.86
NEK3P51956 RNU6-718P-201ENST00000516166 105 ntBASIC3.41□□□□□ -1.86
NEK3P51956 RNU5B-3P-201ENST00000516601 115 ntBASIC3.41□□□□□ -1.86
NEK3P51956 SNORA70.24-201ENST00000517233 118 ntBASIC3.41□□□□□ -1.86
NEK3P51956 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.41□□□□□ -1.86
NEK3P51956 AC023050.3-201ENST00000541142 333 ntBASIC3.41□□□□□ -1.86
NEK3P51956 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.41□□□□□ -1.86
NEK3P51956 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.41□□□□□ -1.86
NEK3P51956 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.41□□□□□ -1.86
NEK3P51956 MIR5195-201ENST00000583555 115 ntBASIC3.41□□□□□ -1.86
NEK3P51956 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.41□□□□□ -1.86
NEK3P51956 AC010525.2-201ENST00000590920 195 ntBASIC3.41□□□□□ -1.86
NEK3P51956 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.41□□□□□ -1.86
NEK3P51956 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NEK3P51956 ATP5A1P2-202ENST00000616464 443 ntBASIC3.41□□□□□ -1.86
NEK3P51956 AL356321.1-201ENST00000621360 228 ntBASIC3.41□□□□□ -1.86
NEK3P51956 RMST_7.1-201ENST00000621935 268 ntBASIC3.41□□□□□ -1.86
NEK3P51956 AC073476.4-201ENST00000628409 72 ntBASIC3.41□□□□□ -1.86
NEK3P51956 AC017071.1-201ENST00000564407 2204 ntBASIC3.41□□□□□ -1.86
NEK3P51956 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.86
NEK3P51956 AC138393.1-203ENST00000327086 343 ntBASIC3.4□□□□□ -1.87
NEK3P51956 RNA5SP383-201ENST00000362934 120 ntBASIC3.4□□□□□ -1.87
NEK3P51956 RNA5SP197-201ENST00000363357 119 ntBASIC3.4□□□□□ -1.87
NEK3P51956 RNA5SP219-201ENST00000390940 113 ntBASIC3.4□□□□□ -1.87
NEK3P51956 MTND5P27-201ENST00000428871 1720 ntBASIC3.4□□□□□ -1.87
NEK3P51956 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.4□□□□□ -1.87
NEK3P51956 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.4□□□□□ -1.87
NEK3P51956 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.4□□□□□ -1.87
NEK3P51956 MTND5P30-201ENST00000452896 1731 ntBASIC3.4□□□□□ -1.87
NEK3P51956 snoU109.2-201ENST00000459316 135 ntBASIC3.4□□□□□ -1.87
NEK3P51956 AC091179.1-201ENST00000461606 579 ntBASIC3.4□□□□□ -1.87
NEK3P51956 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.4□□□□□ -1.87
NEK3P51956 RNU1-143P-201ENST00000516296 146 ntBASIC3.4□□□□□ -1.87
NEK3P51956 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.4□□□□□ -1.87
NEK3P51956 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.4□□□□□ -1.87
NEK3P51956 VN1R80P-201ENST00000597126 338 ntBASIC3.4□□□□□ -1.87
NEK3P51956 AC008121.1-201ENST00000603244 268 ntBASIC3.4□□□□□ -1.87
NEK3P51956 AC092807.2-201ENST00000609367 243 ntBASIC3.4□□□□□ -1.87
NEK3P51956 U1.23-201ENST00000610293 146 ntBASIC3.4□□□□□ -1.87
NEK3P51956 RNU1-68P-201ENST00000615382 146 ntBASIC3.4□□□□□ -1.87
NEK3P51956 AC007014.2-201ENST00000615581 479 ntBASIC3.4□□□□□ -1.87
NEK3P51956 AC010378.1-201ENST00000619270 362 ntBASIC3.4□□□□□ -1.87
NEK3P51956 U1.39-201ENST00000621562 146 ntBASIC3.4□□□□□ -1.87
NEK3P51956 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEK3P51956 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NEK3P51956 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NEK3P51956 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
NEK3P51956 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NEK3P51956 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
NEK3P51956 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.4□□□□□ -1.87
NEK3P51956 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.39□□□□□ -1.87
NEK3P51956 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
NEK3P51956 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NEK3P51956 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.39□□□□□ -1.87
NEK3P51956 Y_RNA.256-201ENST00000364594 104 ntBASIC3.39□□□□□ -1.87
NEK3P51956 RNU6-1303P-201ENST00000364841 107 ntBASIC3.39□□□□□ -1.87
NEK3P51956 MIR491-201ENST00000384877 84 ntBASIC3.39□□□□□ -1.87
NEK3P51956 FTH1P15-201ENST00000406984 280 ntBASIC3.39□□□□□ -1.87
NEK3P51956 RNU4-26P-201ENST00000410270 107 ntBASIC3.39□□□□□ -1.87
NEK3P51956 AL513043.1-201ENST00000439124 535 ntBASIC3.39□□□□□ -1.87
NEK3P51956 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.39□□□□□ -1.87
NEK3P51956 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.39□□□□□ -1.87
NEK3P51956 BX510359.1-201ENST00000456973 237 ntBASIC3.39□□□□□ -1.87
NEK3P51956 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEK3P51956 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.39□□□□□ -1.87
NEK3P51956 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.39□□□□□ -1.87
NEK3P51956 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEK3P51956 AC092747.3-201ENST00000603769 301 ntBASIC3.39□□□□□ -1.87
NEK3P51956 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.39□□□□□ -1.87
NEK3P51956 AC002044.1-201ENST00000606707 158 ntBASIC3.39□□□□□ -1.87
NEK3P51956 AL442067.2-201ENST00000614033 363 ntBASIC3.39□□□□□ -1.87
NEK3P51956 AC138627.2-201ENST00000624202 601 ntBASIC3.39□□□□□ -1.87
NEK3P51956 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NEK3P51956 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NEK3P51956 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.38□□□□□ -1.87
NEK3P51956 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NEK3P51956 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NEK3P51956 Y_RNA.100-201ENST00000363141 102 ntBASIC3.38□□□□□ -1.87
NEK3P51956 Y_RNA.157-201ENST00000363638 102 ntBASIC3.38□□□□□ -1.87
NEK3P51956 U3.12-201ENST00000364498 214 ntBASIC3.38□□□□□ -1.87
NEK3P51956 RNU5E-7P-201ENST00000365290 117 ntBASIC3.38□□□□□ -1.87
NEK3P51956 SNORA9-201ENST00000384215 133 ntBASIC3.38□□□□□ -1.87
NEK3P51956 EIF4E2P1-201ENST00000393781 255 ntBASIC3.38□□□□□ -1.87
NEK3P51956 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.38□□□□□ -1.87
NEK3P51956 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms