Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 C8orf59P2-201ENST00000603441 271 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AL355598.1-201ENST00000604169 202 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 MIR15A-201ENST00000607334 83 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AC099778.2-201ENST00000610904 211 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 AC010338.1-201ENST00000621823 717 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 U2.21-201ENST00000637295 81 ntBASIC3.08□□□□□ -1.92
CLCN3P51790 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLCN3P51790 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCN3P51790 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCN3P51790 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CLCN3P51790 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCN3P51790 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLCN3P51790 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLCN3P51790 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLCN3P51790 RNU2-29P-201ENST00000410423 189 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 AC098614.3-201ENST00000438957 440 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCN3P51790 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.07□□□□□ -1.92
CLCN3P51790 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCN3P51790 AC092436.1-201ENST00000506450 503 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 AC104806.1-201ENST00000508720 308 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLCN3P51790 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCN3P51790 CENPUP1-201ENST00000526649 1202 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCN3P51790 MIR1273C-201ENST00000578669 77 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCN3P51790 FGF7P1-201ENST00000582820 288 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 AC005261.5-201ENST00000596280 355 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.07□□□□□ -1.92
CLCN3P51790 AL354950.2-201ENST00000617939 290 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCN3P51790 AL512643.1-201ENST00000635735 524 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 Z99571.1-201ENST00000636677 394 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.07□□□□□ -1.92
CLCN3P51790 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLCN3P51790 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 AL136360.1-201ENST00000503377 1900 ntBASIC3.07□□□□□ -1.92
CLCN3P51790 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.07□□□□□ -1.92
CLCN3P51790 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLCN3P51790 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLCN3P51790 Y_RNA.72-201ENST00000362894 103 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RNU6-797P-201ENST00000363101 109 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 Y_RNA.157-201ENST00000363638 102 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RNU4-20P-201ENST00000365601 151 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLCN3P51790 RNU6-1029P-201ENST00000384109 107 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RNU6-198P-201ENST00000384258 104 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RNA5SP252-201ENST00000391131 119 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RPL21P3-201ENST00000395517 478 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
CLCN3P51790 RNU4-46P-201ENST00000410818 138 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RNU6-193P-201ENST00000410977 107 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RPL26P27-201ENST00000414397 437 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 OR6C66P-201ENST00000414917 930 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.06□□□□□ -1.92
CLCN3P51790 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCN3P51790 AL160275.3-201ENST00000423876 471 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AC063976.3-201ENST00000426849 329 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 HMGB1P9-201ENST00000429856 646 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.06□□□□□ -1.92
CLCN3P51790 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.06□□□□□ -1.92
CLCN3P51790 AL714022.1-201ENST00000439897 151 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.06□□□□□ -1.92
CLCN3P51790 MTND1P18-201ENST00000448191 573 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AL354685.2-201ENST00000448218 1447 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCN3P51790 AL118520.1-201ENST00000450770 291 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 MTATP6P7-201ENST00000453315 681 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.06□□□□□ -1.92
CLCN3P51790 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.06□□□□□ -1.92
CLCN3P51790 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCN3P51790 PMCHL2-203ENST00000457791 237 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 snoU13.28-201ENST00000459235 104 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RNU7-23P-201ENST00000459465 62 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RPL21P8-201ENST00000465083 535 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AC008628.2-201ENST00000502605 298 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 SUMO2P6-201ENST00000505273 288 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.06□□□□□ -1.92
CLCN3P51790 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.06□□□□□ -1.92
CLCN3P51790 HPRT1P3-201ENST00000539521 576 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 RAB11AP2-201ENST00000545905 639 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCN3P51790 MIR4703-201ENST00000577728 79 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 MIR4513-201ENST00000581077 86 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.06□□□□□ -1.92
CLCN3P51790 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.06□□□□□ -1.92
CLCN3P51790 BNIP3P10-201ENST00000605360 577 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AC021646.1-201ENST00000605469 484 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 AL359314.1-201ENST00000616913 261 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 SNORA50A-202ENST00000629536 136 ntBASIC3.06□□□□□ -1.92
CLCN3P51790 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
CLCN3P51790 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CLCN3P51790 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLCN3P51790 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
CLCN3P51790 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.05□□□□□ -1.92
CLCN3P51790 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLCN3P51790 Y_RNA.86-201ENST00000363020 111 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms