Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RPL21P28-201ENST00000401418 483 ntBASIC4.56□□□□□ -1.68
USP11P51784 SNORA3C-201ENST00000408792 125 ntBASIC4.56□□□□□ -1.68
USP11P51784 RNU2-20P-201ENST00000410425 191 ntBASIC4.56□□□□□ -1.68
USP11P51784 SNORD56-201ENST00000413522 71 ntBASIC4.56□□□□□ -1.68
USP11P51784 RPS12P23-201ENST00000419579 400 ntBASIC4.56□□□□□ -1.68
USP11P51784 AL590556.1-201ENST00000423231 483 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC087650.1-201ENST00000431445 468 ntBASIC4.56□□□□□ -1.68
USP11P51784 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.56□□□□□ -1.68
USP11P51784 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.56□□□□□ -1.68
USP11P51784 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.56□□□□□ -1.68
USP11P51784 USP9YP7-201ENST00000436723 430 ntBASIC4.56□□□□□ -1.68
USP11P51784 AL162151.2-201ENST00000448875 158 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.56□□□□□ -1.68
USP11P51784 USP9YP32-201ENST00000452432 430 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC079354.2-201ENST00000453523 154 ntBASIC4.56□□□□□ -1.68
USP11P51784 RPL21P11-201ENST00000461458 483 ntBASIC4.56□□□□□ -1.68
USP11P51784 RPL21P39-201ENST00000463605 483 ntBASIC4.56□□□□□ -1.68
USP11P51784 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.56□□□□□ -1.68
USP11P51784 AC132942.1-201ENST00000486753 483 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC093591.1-201ENST00000491435 481 ntBASIC4.56□□□□□ -1.68
USP11P51784 RPL21P16-201ENST00000495531 483 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC146944.2-203ENST00000502493 354 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.56□□□□□ -1.68
USP11P51784 AC025554.1-201ENST00000505641 188 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC074198.2-201ENST00000508153 258 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC139495.1-202ENST00000513164 354 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC087441.2-201ENST00000529141 262 ntBASIC4.56□□□□□ -1.68
USP11P51784 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.56□□□□□ -1.68
USP11P51784 AC093023.1-201ENST00000547375 507 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.56□□□□□ -1.68
USP11P51784 MIR1273C-201ENST00000578669 77 ntBASIC4.56□□□□□ -1.68
USP11P51784 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.56□□□□□ -1.68
USP11P51784 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP11P51784 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP11P51784 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP11P51784 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP11P51784 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.56□□□□□ -1.68
USP11P51784 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
USP11P51784 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
USP11P51784 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP11P51784 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP11P51784 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.55□□□□□ -1.68
USP11P51784 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP11P51784 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.55□□□□□ -1.68
USP11P51784 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
USP11P51784 MIR411-201ENST00000362239 96 ntBASIC4.55□□□□□ -1.68
USP11P51784 Y_RNA.358-201ENST00000365491 99 ntBASIC4.55□□□□□ -1.68
USP11P51784 RNU6-827P-201ENST00000365553 106 ntBASIC4.55□□□□□ -1.68
USP11P51784 RNA5SP283-201ENST00000365604 119 ntBASIC4.55□□□□□ -1.68
USP11P51784 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USP11P51784 RNU6-882P-201ENST00000391025 103 ntBASIC4.55□□□□□ -1.68
USP11P51784 MIR190B-201ENST00000401119 79 ntBASIC4.55□□□□□ -1.68
USP11P51784 MIR1251-201ENST00000408552 70 ntBASIC4.55□□□□□ -1.68
USP11P51784 RNA5SP39-201ENST00000411245 120 ntBASIC4.55□□□□□ -1.68
USP11P51784 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.55□□□□□ -1.68
USP11P51784 AL592148.1-201ENST00000413568 445 ntBASIC4.55□□□□□ -1.68
USP11P51784 COX6CP10-201ENST00000416832 224 ntBASIC4.55□□□□□ -1.68
USP11P51784 TMEM167AP1-201ENST00000423409 219 ntBASIC4.55□□□□□ -1.68
USP11P51784 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.55□□□□□ -1.68
USP11P51784 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
USP11P51784 RPL26P6-201ENST00000440913 438 ntBASIC4.55□□□□□ -1.68
USP11P51784 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.55□□□□□ -1.68
USP11P51784 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.55□□□□□ -1.68
USP11P51784 U8.22-201ENST00000459141 133 ntBASIC4.55□□□□□ -1.68
USP11P51784 RNU6-1315P-201ENST00000517187 99 ntBASIC4.55□□□□□ -1.68
USP11P51784 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.55□□□□□ -1.68
USP11P51784 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.55□□□□□ -1.68
USP11P51784 uc_338.32-201ENST00000615087 172 ntBASIC4.55□□□□□ -1.68
USP11P51784 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.55□□□□□ -1.68
USP11P51784 AL353748.2-201ENST00000622148 471 ntBASIC4.55□□□□□ -1.68
USP11P51784 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.55□□□□□ -1.68
USP11P51784 AC243829.7-201ENST00000633081 225 ntBASIC4.55□□□□□ -1.68
USP11P51784 AL359854.1-201ENST00000614203 1594 ntBASIC4.55□□□□□ -1.68
USP11P51784 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP11P51784 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP11P51784 U3.6-201ENST00000363622 211 ntBASIC4.54□□□□□ -1.68
USP11P51784 RNU6-512P-201ENST00000364438 103 ntBASIC4.54□□□□□ -1.68
USP11P51784 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.54□□□□□ -1.68
USP11P51784 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.54□□□□□ -1.68
USP11P51784 AC017079.2-201ENST00000416102 485 ntBASIC4.54□□□□□ -1.68
USP11P51784 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.54□□□□□ -1.68
USP11P51784 AL691449.1-201ENST00000426570 421 ntBASIC4.54□□□□□ -1.68
USP11P51784 TMSB4XP3-201ENST00000445144 114 ntBASIC4.54□□□□□ -1.68
USP11P51784 AC013470.1-201ENST00000453438 462 ntBASIC4.54□□□□□ -1.68
USP11P51784 GMPSP1-201ENST00000514075 579 ntBASIC4.54□□□□□ -1.68
USP11P51784 SERF1AP1-201ENST00000514575 187 ntBASIC4.54□□□□□ -1.68
USP11P51784 RNU6-927P-201ENST00000516199 100 ntBASIC4.54□□□□□ -1.68
USP11P51784 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.54□□□□□ -1.68
USP11P51784 AP002392.1-201ENST00000537692 208 ntBASIC4.54□□□□□ -1.68
USP11P51784 AP002770.2-201ENST00000543613 532 ntBASIC4.54□□□□□ -1.68
USP11P51784 YPEL5P3-201ENST00000547227 352 ntBASIC4.54□□□□□ -1.68
USP11P51784 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.54□□□□□ -1.68
USP11P51784 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.54□□□□□ -1.68
USP11P51784 AL773545.4-201ENST00000637262 310 ntBASIC4.54□□□□□ -1.68
USP11P51784 AL513478.4-201ENST00000641636 310 ntBASIC4.54□□□□□ -1.68
USP11P51784 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.54□□□□□ -1.68
USP11P51784 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
USP11P51784 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.54□□□□□ -1.68
USP11P51784 AL139811.1-201ENST00000424779 2299 ntBASIC4.54□□□□□ -1.68
USP11P51784 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms