Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC006130.2-201ENST00000586202 326 ntBASIC3.02□□□□□ -1.93
CENPAP49450 BNIP3P22-201ENST00000593399 556 ntBASIC3.02□□□□□ -1.93
CENPAP49450 AC010620.2-201ENST00000600135 313 ntBASIC3.02□□□□□ -1.93
CENPAP49450 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.02□□□□□ -1.93
CENPAP49450 AL034408.1-202ENST00000636088 415 ntBASIC3.02□□□□□ -1.93
CENPAP49450 AC026241.1-201ENST00000517873 2142 ntBASIC3.02□□□□□ -1.93
CENPAP49450 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.02□□□□□ -1.93
CENPAP49450 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CENPAP49450 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CENPAP49450 AC121333.1-201ENST00000567488 2709 ntBASIC3.01□□□□□ -1.93
CENPAP49450 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CENPAP49450 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CENPAP49450 MIR148B-201ENST00000362252 99 ntBASIC3.01□□□□□ -1.93
CENPAP49450 RNU6-845P-201ENST00000362578 103 ntBASIC3.01□□□□□ -1.93
CENPAP49450 Y_RNA.70-201ENST00000362886 110 ntBASIC3.01□□□□□ -1.93
CENPAP49450 RNU6-778P-201ENST00000363269 103 ntBASIC3.01□□□□□ -1.93
CENPAP49450 SNORD113-7-201ENST00000363762 77 ntBASIC3.01□□□□□ -1.93
CENPAP49450 SNORD21-201ENST00000383953 95 ntBASIC3.01□□□□□ -1.93
CENPAP49450 Y_RNA.414-201ENST00000384011 101 ntBASIC3.01□□□□□ -1.93
CENPAP49450 SNORA5A-201ENST00000384111 134 ntBASIC3.01□□□□□ -1.93
CENPAP49450 RNU6-166P-201ENST00000384371 107 ntBASIC3.01□□□□□ -1.93
CENPAP49450 MIR218-2-201ENST00000385006 110 ntBASIC3.01□□□□□ -1.93
CENPAP49450 MIR34A-201ENST00000385130 110 ntBASIC3.01□□□□□ -1.93
CENPAP49450 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.01□□□□□ -1.93
CENPAP49450 SKA2P1-201ENST00000425592 390 ntBASIC3.01□□□□□ -1.93
CENPAP49450 RPL23AP22-201ENST00000437556 453 ntBASIC3.01□□□□□ -1.93
CENPAP49450 USP9YP8-201ENST00000441913 500 ntBASIC3.01□□□□□ -1.93
CENPAP49450 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.01□□□□□ -1.93
CENPAP49450 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.01□□□□□ -1.93
CENPAP49450 AC046134.1-201ENST00000514454 666 ntBASIC3.01□□□□□ -1.93
CENPAP49450 RNU6-507P-201ENST00000516045 100 ntBASIC3.01□□□□□ -1.93
CENPAP49450 RNU6-273P-201ENST00000516937 96 ntBASIC3.01□□□□□ -1.93
CENPAP49450 RNU6-1183P-201ENST00000517054 60 ntBASIC3.01□□□□□ -1.93
CENPAP49450 AC069113.1-201ENST00000517763 267 ntBASIC3.01□□□□□ -1.93
CENPAP49450 RNU6-323P-201ENST00000521915 107 ntBASIC3.01□□□□□ -1.93
CENPAP49450 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CENPAP49450 AC087241.2-201ENST00000535801 324 ntBASIC3.01□□□□□ -1.93
CENPAP49450 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.01□□□□□ -1.93
CENPAP49450 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
CENPAP49450 AC005668.1-201ENST00000571142 476 ntBASIC3.01□□□□□ -1.93
CENPAP49450 LRRC37A5P-203ENST00000580181 585 ntBASIC3.01□□□□□ -1.93
CENPAP49450 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.01□□□□□ -1.93
CENPAP49450 AL645944.1-201ENST00000603857 493 ntBASIC3.01□□□□□ -1.93
CENPAP49450 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.01□□□□□ -1.93
CENPAP49450 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.01□□□□□ -1.93
CENPAP49450 U2.21-201ENST00000637295 81 ntBASIC3.01□□□□□ -1.93
CENPAP49450 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CENPAP49450 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CENPAP49450 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CENPAP49450 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.01□□□□□ -1.93
CENPAP49450 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CENPAP49450 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3□□□□□ -1.93
CENPAP49450 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3□□□□□ -1.93
CENPAP49450 RNA5SP124-201ENST00000362739 110 ntBASIC3□□□□□ -1.93
CENPAP49450 U3.12-201ENST00000364498 214 ntBASIC3□□□□□ -1.93
CENPAP49450 SNORD14B-201ENST00000364533 90 ntBASIC3□□□□□ -1.93
CENPAP49450 RNU6-1180P-201ENST00000364935 107 ntBASIC3□□□□□ -1.93
CENPAP49450 Y_RNA.324-201ENST00000365165 102 ntBASIC3□□□□□ -1.93
CENPAP49450 RNU6-831P-201ENST00000384548 107 ntBASIC3□□□□□ -1.93
CENPAP49450 MIR450B-201ENST00000401182 78 ntBASIC3□□□□□ -1.93
CENPAP49450 RNU2-3P-201ENST00000410144 191 ntBASIC3□□□□□ -1.93
CENPAP49450 NDUFS5P4-201ENST00000412983 318 ntBASIC3□□□□□ -1.93
CENPAP49450 CYCSP33-201ENST00000414485 327 ntBASIC3□□□□□ -1.93
CENPAP49450 AL513477.1-202ENST00000417061 214 ntBASIC3□□□□□ -1.93
CENPAP49450 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3□□□□□ -1.93
CENPAP49450 NDUFA5P4-201ENST00000436704 385 ntBASIC3□□□□□ -1.93
CENPAP49450 IFNA20P-201ENST00000436840 528 ntBASIC3□□□□□ -1.93
CENPAP49450 MTND4LP16-201ENST00000440828 295 ntBASIC3□□□□□ -1.93
CENPAP49450 MTATP6P7-201ENST00000453315 681 ntBASIC3□□□□□ -1.93
CENPAP49450 RBMY2UP-201ENST00000453474 324 ntBASIC3□□□□□ -1.93
CENPAP49450 AC087884.1-201ENST00000469738 328 ntBASIC3□□□□□ -1.93
CENPAP49450 AC128713.1-201ENST00000471495 306 ntBASIC3□□□□□ -1.93
CENPAP49450 AC011005.2-201ENST00000487324 359 ntBASIC3□□□□□ -1.93
CENPAP49450 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3□□□□□ -1.93
CENPAP49450 AC091951.2-201ENST00000500762 203 ntBASIC3□□□□□ -1.93
CENPAP49450 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3□□□□□ -1.93
CENPAP49450 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3□□□□□ -1.93
CENPAP49450 RNU6-703P-201ENST00000516946 107 ntBASIC3□□□□□ -1.93
CENPAP49450 TRMT10BP1-201ENST00000519377 943 ntBASIC3□□□□□ -1.93
CENPAP49450 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3□□□□□ -1.93
CENPAP49450 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3□□□□□ -1.93
CENPAP49450 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3□□□□□ -1.93
CENPAP49450 AL391261.3-201ENST00000557194 520 ntBASIC3□□□□□ -1.93
CENPAP49450 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3□□□□□ -1.93
CENPAP49450 AC005498.1-201ENST00000592125 465 ntBASIC3□□□□□ -1.93
CENPAP49450 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CENPAP49450 Y_RNA.804-201ENST00000615262 101 ntBASIC3□□□□□ -1.93
CENPAP49450 AC104260.1-201ENST00000616660 539 ntBASIC3□□□□□ -1.93
CENPAP49450 AC022306.2-201ENST00000617563 647 ntBASIC3□□□□□ -1.93
CENPAP49450 AC005858.4-201ENST00000623191 700 ntBASIC3□□□□□ -1.93
CENPAP49450 CR392039.5-201ENST00000623201 510 ntBASIC3□□□□□ -1.93
CENPAP49450 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
CENPAP49450 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CENPAP49450 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
CENPAP49450 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
CENPAP49450 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CENPAP49450 RNU4-35P-201ENST00000362588 141 ntBASIC2.99□□□□□ -1.93
CENPAP49450 RNU6-384P-201ENST00000364900 104 ntBASIC2.99□□□□□ -1.93
CENPAP49450 RNU6-1013P-201ENST00000384180 107 ntBASIC2.99□□□□□ -1.93
CENPAP49450 RNU6-1009P-201ENST00000390996 107 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms