Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 Y_RNA.68-201ENST00000362881 102 ntBASIC2.35□□□□□ -2.03
ATRXP46100 RNY1P12-201ENST00000364251 105 ntBASIC2.35□□□□□ -2.03
ATRXP46100 Y_RNA.231-201ENST00000364358 102 ntBASIC2.35□□□□□ -2.03
ATRXP46100 RNU6-108P-201ENST00000365558 107 ntBASIC2.35□□□□□ -2.03
ATRXP46100 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
ATRXP46100 RNU6-606P-201ENST00000384721 111 ntBASIC2.35□□□□□ -2.03
ATRXP46100 MIR493-201ENST00000385254 89 ntBASIC2.35□□□□□ -2.03
ATRXP46100 RN7SKP58-201ENST00000411010 305 ntBASIC2.35□□□□□ -2.03
ATRXP46100 PSMA2P3-201ENST00000429685 675 ntBASIC2.35□□□□□ -2.03
ATRXP46100 AC005094.1-201ENST00000440420 368 ntBASIC2.35□□□□□ -2.03
ATRXP46100 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.35□□□□□ -2.03
ATRXP46100 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.35□□□□□ -2.03
ATRXP46100 AC104576.1-201ENST00000524225 88 ntBASIC2.35□□□□□ -2.03
ATRXP46100 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.35□□□□□ -2.03
ATRXP46100 AL121579.1-201ENST00000555129 305 ntBASIC2.35□□□□□ -2.03
ATRXP46100 TGIF1P1-201ENST00000558095 802 ntBASIC2.35□□□□□ -2.03
ATRXP46100 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.35□□□□□ -2.03
ATRXP46100 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.35□□□□□ -2.03
ATRXP46100 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.35□□□□□ -2.03
ATRXP46100 AC092807.2-201ENST00000609367 243 ntBASIC2.35□□□□□ -2.03
ATRXP46100 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ATRXP46100 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ATRXP46100 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
ATRXP46100 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.35□□□□□ -2.03
ATRXP46100 UBE2L2-201ENST00000254302 429 ntBASIC2.34□□□□□ -2.03
ATRXP46100 RNU1-35P-201ENST00000362782 153 ntBASIC2.34□□□□□ -2.03
ATRXP46100 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.34□□□□□ -2.03
ATRXP46100 LAP3P1-201ENST00000403648 294 ntBASIC2.34□□□□□ -2.03
ATRXP46100 RNU2-47P-201ENST00000410649 186 ntBASIC2.34□□□□□ -2.03
ATRXP46100 RNU2-8P-201ENST00000410727 190 ntBASIC2.34□□□□□ -2.03
ATRXP46100 RPL21P24-201ENST00000413752 448 ntBASIC2.34□□□□□ -2.03
ATRXP46100 MTATP6P18-201ENST00000417994 673 ntBASIC2.34□□□□□ -2.03
ATRXP46100 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.34□□□□□ -2.03
ATRXP46100 AL353597.2-202ENST00000434901 373 ntBASIC2.34□□□□□ -2.03
ATRXP46100 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.34□□□□□ -2.03
ATRXP46100 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.34□□□□□ -2.03
ATRXP46100 AC233702.1-201ENST00000482905 502 ntBASIC2.34□□□□□ -2.03
ATRXP46100 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.34□□□□□ -2.03
ATRXP46100 RNU6-864P-201ENST00000516256 108 ntBASIC2.34□□□□□ -2.03
ATRXP46100 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.34□□□□□ -2.03
ATRXP46100 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.34□□□□□ -2.03
ATRXP46100 RAB11AP2-201ENST00000545905 639 ntBASIC2.34□□□□□ -2.03
ATRXP46100 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.34□□□□□ -2.03
ATRXP46100 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.34□□□□□ -2.03
ATRXP46100 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.34□□□□□ -2.03
ATRXP46100 AP006248.2-201ENST00000623309 592 ntBASIC2.34□□□□□ -2.03
ATRXP46100 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ATRXP46100 AL356489.2-201ENST00000566968 3528 ntBASIC2.34□□□□□ -2.03
ATRXP46100 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ATRXP46100 AC138915.3-201ENST00000562908 1389 ntBASIC2.34□□□□□ -2.03
ATRXP46100 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ATRXP46100 Y_RNA.31-201ENST00000362574 102 ntBASIC2.34□□□□□ -2.04
ATRXP46100 U3.20-201ENST00000390909 217 ntBASIC2.34□□□□□ -2.04
ATRXP46100 U3.29-201ENST00000391296 212 ntBASIC2.34□□□□□ -2.04
ATRXP46100 RNU2-68P-201ENST00000410878 191 ntBASIC2.34□□□□□ -2.04
ATRXP46100 AC114491.1-201ENST00000416095 246 ntBASIC2.34□□□□□ -2.04
ATRXP46100 AC119618.1-201ENST00000434191 222 ntBASIC2.34□□□□□ -2.04
ATRXP46100 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.34□□□□□ -2.04
ATRXP46100 RNU7-51P-201ENST00000516560 62 ntBASIC2.34□□□□□ -2.04
ATRXP46100 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.34□□□□□ -2.04
ATRXP46100 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.34□□□□□ -2.04
ATRXP46100 BTF3P12-201ENST00000519620 469 ntBASIC2.34□□□□□ -2.04
ATRXP46100 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.34□□□□□ -2.04
ATRXP46100 MIR5583-1-201ENST00000580941 59 ntBASIC2.34□□□□□ -2.04
ATRXP46100 AC121334.2-201ENST00000605387 271 ntBASIC2.34□□□□□ -2.04
ATRXP46100 AL121757.2-201ENST00000611223 313 ntBASIC2.34□□□□□ -2.04
ATRXP46100 AC009248.2-201ENST00000619826 254 ntBASIC2.34□□□□□ -2.04
ATRXP46100 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
ATRXP46100 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
ATRXP46100 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
ATRXP46100 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATRXP46100 Y_RNA.146-201ENST00000363549 102 ntBASIC2.33□□□□□ -2.04
ATRXP46100 SNORA32.2-201ENST00000384049 122 ntBASIC2.33□□□□□ -2.04
ATRXP46100 RN7SKP32-201ENST00000410167 303 ntBASIC2.33□□□□□ -2.04
ATRXP46100 RPL37P10-201ENST00000412884 288 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.33□□□□□ -2.04
ATRXP46100 SKA2P1-201ENST00000425592 390 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AL450263.2-201ENST00000439400 589 ntBASIC2.33□□□□□ -2.04
ATRXP46100 RAC1P7-201ENST00000445367 377 ntBASIC2.33□□□□□ -2.04
ATRXP46100 RPL29P29-201ENST00000448725 423 ntBASIC2.33□□□□□ -2.04
ATRXP46100 HMGN1P10-201ENST00000474557 553 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ATRXP46100 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.33□□□□□ -2.04
ATRXP46100 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.33□□□□□ -2.04
ATRXP46100 AC103996.1-201ENST00000555468 102 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.33□□□□□ -2.04
ATRXP46100 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.33□□□□□ -2.04
ATRXP46100 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ATRXP46100 POLR3GP2-201ENST00000588366 668 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AL031176.1-201ENST00000604554 466 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AC009233.1-201ENST00000616477 371 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AC002546.1-201ENST00000588041 2504 ntBASIC2.33□□□□□ -2.04
ATRXP46100 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
ATRXP46100 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATRXP46100 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
ATRXP46100 Y_RNA.2-201ENST00000362330 96 ntBASIC2.33□□□□□ -2.04
ATRXP46100 Y_RNA.162-201ENST00000363683 102 ntBASIC2.33□□□□□ -2.04
ATRXP46100 RNU6-1322P-201ENST00000364309 107 ntBASIC2.33□□□□□ -2.04
ATRXP46100 RNU6-1074P-201ENST00000383995 104 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AL024474.1-201ENST00000404655 591 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms