Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC136618.2-201ENST00000575091 400 ntBASIC1.89□□□□□ -2.11
TNFSF9P41273 AP001004.1-201ENST00000582468 324 ntBASIC1.89□□□□□ -2.11
TNFSF9P41273 AC007363.1-201ENST00000604736 620 ntBASIC1.89□□□□□ -2.11
TNFSF9P41273 AC009233.1-201ENST00000616477 371 ntBASIC1.89□□□□□ -2.11
TNFSF9P41273 U4atac.1-201ENST00000618345 95 ntBASIC1.89□□□□□ -2.11
TNFSF9P41273 AL589994.2-201ENST00000621124 579 ntBASIC1.89□□□□□ -2.11
TNFSF9P41273 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TNFSF9P41273 AL391994.1-201ENST00000254724 282 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TNFSF9P41273 U3.40-201ENST00000408706 208 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 ELOCP17-201ENST00000414751 326 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 RAC1P6-201ENST00000423911 575 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 AC108667.1-201ENST00000428618 249 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.88□□□□□ -2.11
TNFSF9P41273 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.88□□□□□ -2.11
TNFSF9P41273 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.88□□□□□ -2.11
TNFSF9P41273 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.88□□□□□ -2.11
TNFSF9P41273 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.88□□□□□ -2.11
TNFSF9P41273 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.88□□□□□ -2.11
TNFSF9P41273 AC104685.1-201ENST00000502445 371 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.88□□□□□ -2.11
TNFSF9P41273 RN7SKP265-201ENST00000516448 223 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 SNORA25.15-201ENST00000516487 89 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 CYCSP26-201ENST00000534107 320 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.88□□□□□ -2.11
TNFSF9P41273 AC121758.2-201ENST00000553271 193 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 LINC00933-203ENST00000559812 219 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 MTATP6P24-201ENST00000576835 677 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.88□□□□□ -2.11
TNFSF9P41273 AC018714.1-201ENST00000605028 208 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 AC009090.3-201ENST00000616553 565 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 MIR6134-201ENST00000617606 109 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 AC017037.3-201ENST00000625016 472 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.88□□□□□ -2.11
TNFSF9P41273 AL512643.1-201ENST00000635735 524 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 AC006927.4-201ENST00000639187 543 ntBASIC1.88□□□□□ -2.11
TNFSF9P41273 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
TNFSF9P41273 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.87□□□□□ -2.11
TNFSF9P41273 SNORA72.3-201ENST00000365074 132 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 RNA5SP190-201ENST00000365222 118 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 SNORA17.3-201ENST00000391159 129 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 Y_RNA.595-201ENST00000410403 105 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AC078974.1-201ENST00000411597 223 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 RPS12P24-201ENST00000412619 387 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 HMGN2P19-201ENST00000425149 265 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AL593851.1-201ENST00000426171 157 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.87□□□□□ -2.11
TNFSF9P41273 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.87□□□□□ -2.11
TNFSF9P41273 AC016691.1-201ENST00000441321 413 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AL606662.1-201ENST00000445763 553 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 RNU6-953P-201ENST00000459154 107 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 SNORD13-201ENST00000459299 104 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AC023194.1-201ENST00000493084 308 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 Y_RNA.676-201ENST00000516393 96 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 RNU5A-4P-201ENST00000516588 111 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.87□□□□□ -2.11
TNFSF9P41273 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
TNFSF9P41273 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.87□□□□□ -2.11
TNFSF9P41273 MTND1P24-201ENST00000552175 861 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 OR11H5P-201ENST00000554039 926 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AC007375.1-201ENST00000554513 578 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.87□□□□□ -2.11
TNFSF9P41273 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.87□□□□□ -2.11
TNFSF9P41273 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.87□□□□□ -2.11
TNFSF9P41273 AC007229.1-201ENST00000590455 412 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 KC877982.1-201ENST00000602313 470 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AL031281.1-201ENST00000604049 488 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AL358072.1-201ENST00000604156 575 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AC016727.1-205ENST00000605437 569 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 MIR6840-201ENST00000611937 71 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AC007671.2-201ENST00000637344 619 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 AC103706.2-201ENST00000638080 240 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.87□□□□□ -2.11
TNFSF9P41273 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
TNFSF9P41273 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TNFSF9P41273 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
TNFSF9P41273 CDC27P3-201ENST00000635418 1910 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 RNA5SP240-201ENST00000365355 128 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 FCF1P10-201ENST00000407590 479 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 RPL22P18-201ENST00000417197 377 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.86□□□□□ -2.11
TNFSF9P41273 AL160275.3-201ENST00000423876 471 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AL353706.1-201ENST00000436728 494 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AC009238.1-201ENST00000442165 424 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.86□□□□□ -2.11
TNFSF9P41273 AC009237.6-201ENST00000446969 424 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.86□□□□□ -2.11
TNFSF9P41273 Z73417.1-201ENST00000447373 778 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 BTF3P15-201ENST00000455606 336 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.86□□□□□ -2.11
TNFSF9P41273 CYP2C59P-201ENST00000457790 269 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 AC055731.1-201ENST00000474387 401 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 MTND1P3-201ENST00000484956 952 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 RPS27P21-201ENST00000486977 252 ntBASIC1.86□□□□□ -2.11
TNFSF9P41273 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
TNFSF9P41273 SNORA31.25-201ENST00000517242 134 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms