Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RPL23AP35-201ENST00000451906 501 ntBASIC0.69□□□□□ -2.3
CKS2P33552 RPL30P1-201ENST00000488676 339 ntBASIC0.69□□□□□ -2.3
CKS2P33552 AC098799.1-201ENST00000504752 800 ntBASIC0.69□□□□□ -2.3
CKS2P33552 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.69□□□□□ -2.3
CKS2P33552 AP001189.2-201ENST00000527320 189 ntBASIC0.69□□□□□ -2.3
CKS2P33552 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.69□□□□□ -2.3
CKS2P33552 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.69□□□□□ -2.3
CKS2P33552 MIR4513-201ENST00000581077 86 ntBASIC0.69□□□□□ -2.3
CKS2P33552 BNIP3P22-201ENST00000593399 556 ntBASIC0.69□□□□□ -2.3
CKS2P33552 NIFKP6-201ENST00000598115 845 ntBASIC0.69□□□□□ -2.3
CKS2P33552 AC013244.2-201ENST00000603396 103 ntBASIC0.69□□□□□ -2.3
CKS2P33552 AP002906.1-201ENST00000603405 233 ntBASIC0.69□□□□□ -2.3
CKS2P33552 AP000860.1-201ENST00000605250 559 ntBASIC0.69□□□□□ -2.3
CKS2P33552 AC012360.2-201ENST00000609349 391 ntBASIC0.69□□□□□ -2.3
CKS2P33552 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.69□□□□□ -2.3
CKS2P33552 AL353770.2-201ENST00000620024 78 ntBASIC0.69□□□□□ -2.3
CKS2P33552 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
CKS2P33552 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CKS2P33552 ICE2P2-201ENST00000483823 2787 ntBASIC0.68□□□□□ -2.3
CKS2P33552 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.68□□□□□ -2.3
CKS2P33552 RNU6-223P-201ENST00000362830 107 ntBASIC0.68□□□□□ -2.3
CKS2P33552 Y_RNA.99-201ENST00000363138 105 ntBASIC0.68□□□□□ -2.3
CKS2P33552 RNU6-414P-201ENST00000363705 104 ntBASIC0.68□□□□□ -2.3
CKS2P33552 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.68□□□□□ -2.3
CKS2P33552 AL158050.1-201ENST00000416077 457 ntBASIC0.68□□□□□ -2.3
CKS2P33552 USP9YP18-201ENST00000425912 695 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.68□□□□□ -2.3
CKS2P33552 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.68□□□□□ -2.3
CKS2P33552 AC114878.1-201ENST00000441166 358 ntBASIC0.68□□□□□ -2.3
CKS2P33552 USP9YP17-201ENST00000444617 696 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.68□□□□□ -2.3
CKS2P33552 AC021382.1-201ENST00000483523 359 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AP001025.1-201ENST00000486139 332 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AC114981.1-201ENST00000503897 678 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AC091917.2-201ENST00000505002 744 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AC117532.1-201ENST00000514638 323 ntBASIC0.68□□□□□ -2.3
CKS2P33552 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.68□□□□□ -2.3
CKS2P33552 RNU2-53P-201ENST00000516257 147 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.68□□□□□ -2.3
CKS2P33552 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.68□□□□□ -2.3
CKS2P33552 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.68□□□□□ -2.3
CKS2P33552 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.68□□□□□ -2.3
CKS2P33552 AC073410.2-201ENST00000603240 332 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AC123912.5-201ENST00000605470 343 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.68□□□□□ -2.3
CKS2P33552 AC004492.1-201ENST00000607036 742 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AL357080.1-201ENST00000617394 239 ntBASIC0.68□□□□□ -2.3
CKS2P33552 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.68□□□□□ -2.3
CKS2P33552 MIR6852-201ENST00000621699 66 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AL445264.1-201ENST00000621719 171 ntBASIC0.68□□□□□ -2.3
CKS2P33552 AC009269.6-201ENST00000621778 588 ntBASIC0.68□□□□□ -2.3
CKS2P33552 U6.99-201ENST00000637524 83 ntBASIC0.68□□□□□ -2.3
CKS2P33552 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CKS2P33552 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
CKS2P33552 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CKS2P33552 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.67□□□□□ -2.3
CKS2P33552 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CKS2P33552 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CKS2P33552 SNORD114-19-201ENST00000363072 75 ntBASIC0.67□□□□□ -2.3
CKS2P33552 RNU1-22P-201ENST00000363334 158 ntBASIC0.67□□□□□ -2.3
CKS2P33552 RNU6-112P-201ENST00000363599 104 ntBASIC0.67□□□□□ -2.3
CKS2P33552 RNU6-898P-201ENST00000365627 104 ntBASIC0.67□□□□□ -2.3
CKS2P33552 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CKS2P33552 MIR186-201ENST00000384988 86 ntBASIC0.67□□□□□ -2.3
CKS2P33552 RNU4-27P-201ENST00000410889 139 ntBASIC0.67□□□□□ -2.3
CKS2P33552 AC069282.1-201ENST00000411911 526 ntBASIC0.67□□□□□ -2.3
CKS2P33552 BTF3P4-201ENST00000418852 495 ntBASIC0.67□□□□□ -2.3
CKS2P33552 SNRPEP10-201ENST00000420249 274 ntBASIC0.67□□□□□ -2.3
CKS2P33552 MTND4LP7-201ENST00000431728 294 ntBASIC0.67□□□□□ -2.3
CKS2P33552 MTND2P4-201ENST00000445034 1004 ntBASIC0.67□□□□□ -2.3
CKS2P33552 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.67□□□□□ -2.3
CKS2P33552 HMGN2P18-201ENST00000450680 270 ntBASIC0.67□□□□□ -2.3
CKS2P33552 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.67□□□□□ -2.3
CKS2P33552 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.67□□□□□ -2.3
CKS2P33552 RPL26P26-201ENST00000480251 434 ntBASIC0.67□□□□□ -2.3
CKS2P33552 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.67□□□□□ -2.3
CKS2P33552 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.67□□□□□ -2.3
CKS2P33552 RNU6-390P-201ENST00000516259 103 ntBASIC0.67□□□□□ -2.3
CKS2P33552 AC023632.1-201ENST00000518463 375 ntBASIC0.67□□□□□ -2.3
CKS2P33552 CYP3A52P-201ENST00000563326 91 ntBASIC0.67□□□□□ -2.3
CKS2P33552 MIR3169-201ENST00000578032 83 ntBASIC0.67□□□□□ -2.3
CKS2P33552 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.67□□□□□ -2.3
CKS2P33552 AL020996.3-201ENST00000606617 222 ntBASIC0.67□□□□□ -2.3
CKS2P33552 AC096772.1-201ENST00000609146 564 ntBASIC0.67□□□□□ -2.3
CKS2P33552 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CKS2P33552 AC120349.2-201ENST00000625002 298 ntBASIC0.67□□□□□ -2.3
CKS2P33552 AC068205.3-201ENST00000636385 468 ntBASIC0.67□□□□□ -2.3
CKS2P33552 FARSBP1-201ENST00000435808 1778 ntBASIC0.67□□□□□ -2.3
CKS2P33552 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
CKS2P33552 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.66□□□□□ -2.3
CKS2P33552 RNU6-23P-201ENST00000363283 107 ntBASIC0.66□□□□□ -2.3
CKS2P33552 RNU6-97P-201ENST00000363387 104 ntBASIC0.66□□□□□ -2.3
CKS2P33552 RNU1-124P-201ENST00000363861 145 ntBASIC0.66□□□□□ -2.3
CKS2P33552 RNU6-944P-201ENST00000364023 107 ntBASIC0.66□□□□□ -2.3
CKS2P33552 RNU4-51P-201ENST00000364206 140 ntBASIC0.66□□□□□ -2.3
CKS2P33552 RNU6-432P-201ENST00000384196 109 ntBASIC0.66□□□□□ -2.3
CKS2P33552 RNU6-1207P-201ENST00000384343 107 ntBASIC0.66□□□□□ -2.3
CKS2P33552 RPS12P24-201ENST00000412619 387 ntBASIC0.66□□□□□ -2.3
CKS2P33552 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.66□□□□□ -2.3
CKS2P33552 CST2P1-201ENST00000425770 87 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms