Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC12P31275 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC12P31275 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC12P31275 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC12P31275 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXC12P31275 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC12P31275 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC12P31275 UQCRHP4-201ENST00000471686 272 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 AL592156.1-201ENST00000508758 304 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 RNU1-61P-201ENST00000516107 151 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 SNORA67.7-201ENST00000516664 135 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 RNU6-1271P-201ENST00000517049 105 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 AP003730.1-201ENST00000524605 285 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 MIR4444-1-201ENST00000581696 74 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 MIR4444-2-201ENST00000584390 74 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 AC006077.1-201ENST00000604746 343 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC12P31275 AL021997.2-201ENST00000615674 271 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 AL391261.4-201ENST00000616012 481 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 AC241585.2-209ENST00000638217 143 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 MIR492-201ENST00000638676 116 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC12P31275 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC12P31275 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXC12P31275 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC12P31275 CUL1P1-201ENST00000509510 2425 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXC12P31275 AC007256.1-201ENST00000392253 2765 ntBASIC3.91□□□□□ -1.78
HOXC12P31275 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC12P31275 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
HOXC12P31275 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HOXC12P31275 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HOXC12P31275 AC009541.1-201ENST00000438279 2662 ntBASIC3.9□□□□□ -1.78
HOXC12P31275 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
HOXC12P31275 RNU6-942P-201ENST00000363002 107 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 RNU4-50P-201ENST00000364361 141 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 RNA5SP366-201ENST00000365454 123 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 SNORA63.7-201ENST00000365579 123 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 Y_RNA.405-201ENST00000383979 100 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 Y_RNA.451-201ENST00000384200 100 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 RNU1-13P-201ENST00000384499 162 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 Y_RNA.524-201ENST00000384564 100 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 Y_RNA.561-201ENST00000384694 100 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HOXC12P31275 SNORA12.2-201ENST00000391040 156 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC12P31275 RNA5SP317-201ENST00000410176 116 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 Y_RNA.592-201ENST00000410274 109 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 RNA5SP311-201ENST00000411290 116 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 AP000275.1-201ENST00000411943 390 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC12P31275 USP9YP16-201ENST00000430287 407 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 SNORA71B-202ENST00000439232 272 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 AC073910.1-201ENST00000445047 438 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 AC125238.1-201ENST00000448842 249 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 PCNPP5-201ENST00000452246 481 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 USP9YP23-201ENST00000455085 407 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 HMGN2P16-201ENST00000456802 261 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 PPIAP15-201ENST00000479662 484 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC12P31275 RPS29P20-201ENST00000489592 171 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 RNA5SP315-201ENST00000516340 116 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 RNA5SP312-201ENST00000517068 116 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC12P31275 MIR3158-1-201ENST00000583596 81 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 AC244505.7-201ENST00000599675 272 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXC12P31275 AC006133.1-201ENST00000617106 264 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 XIST_intron.1-201ENST00000619444 68 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 MIR3653-201ENST00000625572 110 ntBASIC3.9□□□□□ -1.79
HOXC12P31275 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC12P31275 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXC12P31275 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC12P31275 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXC12P31275 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HOXC12P31275 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC12P31275 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC12P31275 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC12P31275 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXC12P31275 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXC12P31275 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC12P31275 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC12P31275 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC12P31275 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC12P31275 RNU6-874P-201ENST00000362390 105 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 SNORD116-20-201ENST00000384529 92 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 RNU6-713P-201ENST00000384761 107 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 MT-TG-201ENST00000387429 68 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 RPL21P17-201ENST00000397467 475 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 RPL21P1-201ENST00000399532 476 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 MTCYBP2-201ENST00000407745 171 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 RNU6-1245P-201ENST00000411130 106 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 NDUFS5P4-201ENST00000412983 318 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HOXC12P31275 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC12P31275 RNU7-87P-201ENST00000459343 62 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 AL049830.2-201ENST00000480072 201 ntBASIC3.89□□□□□ -1.79
HOXC12P31275 AC006445.2-201ENST00000510061 472 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms