Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC020658.4-201ENST00000613987 684 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 AL118556.2-201ENST00000614375 824 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 U4atac.1-201ENST00000618345 95 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
COL4A5P29400 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.17□□□□□ -2.22
COL4A5P29400 AL442644.1-201ENST00000454390 3105 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 MIR330-201ENST00000362196 94 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 RNU6-1207P-201ENST00000384343 107 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 RNU6-997P-201ENST00000384725 107 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 RNU6-278P-201ENST00000390945 109 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AL590084.2-201ENST00000401481 382 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 RNU2-33P-201ENST00000410344 192 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 RPS20P15-201ENST00000412792 311 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AL451054.2-201ENST00000420896 202 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.16□□□□□ -2.22
COL4A5P29400 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A5P29400 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A5P29400 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A5P29400 RPL23AP6-201ENST00000446637 472 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL4A5P29400 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.16□□□□□ -2.22
COL4A5P29400 RNA5SP112-201ENST00000515937 99 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.16□□□□□ -2.22
COL4A5P29400 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 MIR3167-201ENST00000579623 85 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
COL4A5P29400 AC108706.1-201ENST00000611053 297 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AC008555.8-201ENST00000623602 2168 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A5P29400 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.16□□□□□ -2.22
COL4A5P29400 AC091948.2-201ENST00000636510 279 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
COL4A5P29400 SNORA46.1-201ENST00000391069 153 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 RNA5SP212-201ENST00000391223 107 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 RPL22P22-201ENST00000395439 379 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 RNU2-49P-201ENST00000410666 184 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 RNU2-63P-201ENST00000410792 194 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.16□□□□□ -2.22
COL4A5P29400 AL160275.3-201ENST00000423876 471 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AP000949.1-201ENST00000438328 629 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.16□□□□□ -2.22
COL4A5P29400 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A5P29400 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.16□□□□□ -2.22
COL4A5P29400 AC055731.1-201ENST00000474387 401 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.16□□□□□ -2.22
COL4A5P29400 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.16□□□□□ -2.22
COL4A5P29400 AC110760.3-202ENST00000515177 371 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.16□□□□□ -2.22
COL4A5P29400 AC006199.1-201ENST00000548728 219 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 HIGD1AP17-201ENST00000554576 276 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 AL357094.1-201ENST00000603845 844 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL4A5P29400 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.16□□□□□ -2.22
COL4A5P29400 U2.21-201ENST00000637295 81 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 MIR924-201ENST00000638017 53 ntBASIC1.16□□□□□ -2.22
COL4A5P29400 ZNF702P-202ENST00000434269 1966 ntBASIC1.15□□□□□ -2.22
COL4A5P29400 AC009541.1-201ENST00000438279 2662 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
COL4A5P29400 RNU6-778P-201ENST00000363269 103 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 RNU6-97P-201ENST00000363387 104 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 SNORD114-23-201ENST00000363536 72 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 Y_RNA.294-201ENST00000364916 102 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
COL4A5P29400 RNU6-207P-201ENST00000384137 107 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 NDUFS5P1-201ENST00000405668 289 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 OR6C66P-201ENST00000414917 930 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 ZNF90P2-204ENST00000419323 1075 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 XKRYP1-201ENST00000423438 492 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 XKRYP2-201ENST00000432915 492 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AC015922.2-201ENST00000435593 184 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 GPM6BP3-201ENST00000442797 145 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
COL4A5P29400 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.15□□□□□ -2.23
COL4A5P29400 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.15□□□□□ -2.23
COL4A5P29400 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.15□□□□□ -2.23
COL4A5P29400 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.15□□□□□ -2.23
COL4A5P29400 AC090079.2-201ENST00000575289 768 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AC026271.5-201ENST00000577873 130 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AC098483.2-201ENST00000603158 454 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AC005034.5-201ENST00000604219 466 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AL627230.6-201ENST00000611129 280 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AL354696.1-201ENST00000614652 497 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AL603758.1-201ENST00000618654 241 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AP003400.5-201ENST00000624827 617 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 AC010487.4-201ENST00000637027 61 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
COL4A5P29400 AC018630.2-201ENST00000534866 2403 ntBASIC1.15□□□□□ -2.23
COL4A5P29400 TEX21P-201ENST00000447107 1476 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 AL390862.1-201ENST00000635467 1469 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 RNU6-1280P-201ENST00000365211 107 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 RNU6-609P-201ENST00000365459 107 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 RNU6-114P-201ENST00000384704 105 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 RNU1-78P-201ENST00000391248 165 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.14□□□□□ -2.23
COL4A5P29400 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.14□□□□□ -2.23
COL4A5P29400 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
COL4A5P29400 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 RPL30P4-201ENST00000429309 333 ntBASIC1.14□□□□□ -2.23
COL4A5P29400 RPL7P34-201ENST00000433316 712 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms