Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.3□□□□□ -1.88
EPHA3P29320 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.3□□□□□ -1.88
EPHA3P29320 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.3□□□□□ -1.88
EPHA3P29320 UBE2V1P4-201ENST00000425374 344 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 TOMM20P4-201ENST00000427861 435 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.3□□□□□ -1.88
EPHA3P29320 HIGD1AP11-201ENST00000438361 280 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 RPS29P7-201ENST00000439662 171 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 AL031274.1-201ENST00000450334 232 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 U8.18-201ENST00000459285 133 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 AL049830.2-201ENST00000480072 201 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 RPS29P20-201ENST00000489592 171 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 RNU6-1183P-201ENST00000517054 60 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 RNU6-1213P-201ENST00000517075 94 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.3□□□□□ -1.88
EPHA3P29320 MIR3609-201ENST00000582661 80 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.3□□□□□ -1.88
EPHA3P29320 MTND4LP5-201ENST00000605152 292 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 AL121917.1-203ENST00000605534 577 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 AC007742.2-201ENST00000618226 398 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 AC138627.2-201ENST00000624202 601 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 Z69720.2-201ENST00000624755 279 ntBASIC3.3□□□□□ -1.88
EPHA3P29320 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.3□□□□□ -1.88
EPHA3P29320 AC017071.1-201ENST00000564407 2204 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
EPHA3P29320 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
EPHA3P29320 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
EPHA3P29320 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
EPHA3P29320 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
EPHA3P29320 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 RNA5SP383-201ENST00000362934 120 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 Y_RNA.151-201ENST00000363566 112 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
EPHA3P29320 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 MTCYBP4-201ENST00000401524 249 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AP000567.1-201ENST00000406413 156 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 ATP5A1P2-201ENST00000412323 255 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 SNORD56-201ENST00000413522 71 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AC245054.2-201ENST00000415639 319 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AL096701.2-201ENST00000416920 238 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AC016831.2-201ENST00000417179 352 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 MTCO2P12-201ENST00000427426 682 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 SAR1AP4-201ENST00000429225 591 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.29□□□□□ -1.88
EPHA3P29320 AC007389.2-201ENST00000434630 306 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AL590664.1-201ENST00000448065 339 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 U3.44-201ENST00000458938 192 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 RPL30P14-201ENST00000482744 348 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AC116337.1-201ENST00000509680 687 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 Y_RNA.687-201ENST00000516558 91 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 RNU6-1016P-201ENST00000516689 94 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 RNU1-54P-201ENST00000517181 120 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.29□□□□□ -1.88
EPHA3P29320 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.29□□□□□ -1.88
EPHA3P29320 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 ANP32BP3-201ENST00000559213 706 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.29□□□□□ -1.88
EPHA3P29320 MIR5685-201ENST00000579080 79 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.29□□□□□ -1.88
EPHA3P29320 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.29□□□□□ -1.88
EPHA3P29320 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 AC008121.1-201ENST00000603244 268 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AL355598.1-201ENST00000604169 202 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.29□□□□□ -1.88
EPHA3P29320 MIR6076-201ENST00000617521 113 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 AC073308.1-201ENST00000623696 305 ntBASIC3.29□□□□□ -1.88
EPHA3P29320 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
EPHA3P29320 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
EPHA3P29320 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
EPHA3P29320 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
EPHA3P29320 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
EPHA3P29320 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
EPHA3P29320 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.28□□□□□ -1.88
EPHA3P29320 SNORD62.1-201ENST00000362541 86 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 Y_RNA.138-201ENST00000363462 102 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 RNU6-1188P-201ENST00000363795 107 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 RNU6-43P-201ENST00000384302 107 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 MIR888-201ENST00000401186 77 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 RPL5P18-201ENST00000406671 891 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
EPHA3P29320 RPL26P27-201ENST00000414397 437 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 AL159987.2-201ENST00000432754 307 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 SSXP4-201ENST00000451349 245 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 MTATP6P7-201ENST00000453315 681 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 RPL23AP45-201ENST00000476406 468 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 AC018437.1-201ENST00000492214 406 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.28□□□□□ -1.88
EPHA3P29320 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 IGKV2-23-201ENST00000518729 323 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 AC093331.1-201ENST00000521474 169 ntBASIC3.28□□□□□ -1.88
EPHA3P29320 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.28□□□□□ -1.88
EPHA3P29320 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms