Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF4P23510 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF4P23510 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF4P23510 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF4P23510 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TNFSF4P23510 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFSF4P23510 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TNFSF4P23510 CEP170P1-201ENST00000502249 4587 ntBASIC3.2□□□□□ -1.9
TNFSF4P23510 AL109809.4-201ENST00000603520 2185 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TNFSF4P23510 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
TNFSF4P23510 SNORD56.1-201ENST00000362913 68 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 SNORA68.1-201ENST00000364537 132 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 RNU6-336P-201ENST00000364891 107 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 SNORA62.3-201ENST00000365110 153 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TNFSF4P23510 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TNFSF4P23510 SNORD116-11-201ENST00000383882 92 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 EI24P2-201ENST00000397776 1076 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 RNA5SP390-201ENST00000410191 113 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFSF4P23510 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFSF4P23510 RPL7P37-201ENST00000425095 738 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 AL645568.3-201ENST00000433683 316 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFSF4P23510 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
TNFSF4P23510 AP001324.2-201ENST00000461163 319 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 TRBV12-2-201ENST00000489763 344 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 AC006445.1-201ENST00000491925 405 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 HMGN1P12-201ENST00000499125 195 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 RNU1-45P-201ENST00000517191 141 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFSF4P23510 CKS1BP7-201ENST00000522230 235 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFSF4P23510 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.19□□□□□ -1.9
TNFSF4P23510 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFSF4P23510 AC103996.1-201ENST00000555468 102 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFSF4P23510 AC026464.5-201ENST00000562497 722 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 AC012493.2-201ENST00000595083 291 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFSF4P23510 AC064836.2-201ENST00000609491 462 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 uc_338.5-201ENST00000611839 155 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 AC024581.2-201ENST00000619986 252 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.19□□□□□ -1.9
TNFSF4P23510 AL359854.1-201ENST00000614203 1594 ntBASIC3.19□□□□□ -1.9
TNFSF4P23510 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
TNFSF4P23510 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFSF4P23510 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF4P23510 AC010329.5-201ENST00000623497 2174 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF4P23510 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF4P23510 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFSF4P23510 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.18□□□□□ -1.9
TNFSF4P23510 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF4P23510 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TNFSF4P23510 RNU6-428P-201ENST00000362942 107 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 Y_RNA.301-201ENST00000364990 103 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 RNU6-622P-201ENST00000384272 103 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TNFSF4P23510 AL139396.1-201ENST00000421137 167 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFSF4P23510 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFSF4P23510 AC009296.1-201ENST00000443146 155 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 MTND4P18-201ENST00000447010 465 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 MTND5P20-201ENST00000448677 143 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF4P23510 AL133162.1-201ENST00000463228 453 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 RPL22P13-201ENST00000493291 347 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 SNORA31.6-201ENST00000516241 130 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 RNU6-273P-201ENST00000516937 96 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFSF4P23510 UBE2V2P2-201ENST00000587677 504 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 RPS15AP11-201ENST00000594193 385 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 AC009314.1-201ENST00000603871 304 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 AL160281.1-201ENST00000605307 311 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 SNORA62.6-201ENST00000606322 83 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 AC005046.1-201ENST00000608515 625 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 AC092628.2-201ENST00000622492 339 ntBASIC3.18□□□□□ -1.9
TNFSF4P23510 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
TNFSF4P23510 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF4P23510 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF4P23510 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF4P23510 AC138915.1-201ENST00000565427 1685 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.17□□□□□ -1.9
TNFSF4P23510 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
TNFSF4P23510 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TNFSF4P23510 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TNFSF4P23510 AL359837.1-201ENST00000381357 287 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AL360182.1-201ENST00000397433 468 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 NCOR1P3-201ENST00000420479 303 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AL513043.1-201ENST00000439124 535 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AP001025.1-201ENST00000486139 332 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 MTCO1P29-201ENST00000496868 288 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 AC097462.2-201ENST00000504623 481 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 RAC1P2-201ENST00000511164 579 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 SMURF2P1-201ENST00000514992 481 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 RNU6-566P-201ENST00000516790 107 ntBASIC3.17□□□□□ -1.9
TNFSF4P23510 RNU7-30P-201ENST00000516835 62 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms