Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SCARNA14-201ENST00000516903 136 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 RNU7-4P-201ENST00000516961 62 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 RNU6-1271P-201ENST00000517049 105 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 AC022695.1-201ENST00000522089 237 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.19□□□□□ -1.74
ITGA4P13612 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ITGA4P13612 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.19□□□□□ -1.74
ITGA4P13612 AC004584.2-201ENST00000570407 410 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 AC006600.1-201ENST00000572529 153 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.19□□□□□ -1.74
ITGA4P13612 AC016727.2-201ENST00000603988 621 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 LINC00901.1-201ENST00000617252 152 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 MIR6075-201ENST00000620782 95 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.19□□□□□ -1.74
ITGA4P13612 LINC02471-203ENST00000641941 4752 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ITGA4P13612 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
ITGA4P13612 UBE3AP2-201ENST00000429033 2259 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 AL359693.1-201ENST00000614959 2407 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.18□□□□□ -1.74
ITGA4P13612 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ITGA4P13612 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ITGA4P13612 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ITGA4P13612 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
ITGA4P13612 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.18□□□□□ -1.74
ITGA4P13612 IPO8P1-201ENST00000455509 3109 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 Y_RNA.152-201ENST00000363578 100 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 SNORA63.7-201ENST00000365579 123 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 MIR625-201ENST00000385047 85 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 MIR34A-201ENST00000385130 110 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ITGA4P13612 MIR1252-201ENST00000408861 65 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 AL159987.2-201ENST00000432754 307 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.18□□□□□ -1.74
ITGA4P13612 Z82210.1-201ENST00000440037 231 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ITGA4P13612 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ITGA4P13612 OR2AQ1P-201ENST00000451972 200 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 RN7SL283P-201ENST00000489055 303 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 RPL22P13-201ENST00000493291 347 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 AK3P2-201ENST00000507976 429 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 NDUFB4P9-201ENST00000511646 388 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 Y_RNA.715-201ENST00000517082 110 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.18□□□□□ -1.74
ITGA4P13612 AP005902.1-201ENST00000521358 186 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 AC040926.1-201ENST00000530195 238 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.18□□□□□ -1.74
ITGA4P13612 MYL12BP1-201ENST00000569826 507 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 AC136601.2-201ENST00000604356 474 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ITGA4P13612 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
ITGA4P13612 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ITGA4P13612 ZNF299P-201ENST00000406845 1804 ntBASIC4.18□□□□□ -1.74
ITGA4P13612 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.18□□□□□ -1.74
ITGA4P13612 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ITGA4P13612 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ITGA4P13612 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ITGA4P13612 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ITGA4P13612 AC007390.2-201ENST00000606229 3803 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ITGA4P13612 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.17□□□□□ -1.74
ITGA4P13612 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ITGA4P13612 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
ITGA4P13612 RNU6-600P-201ENST00000362524 99 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 RNU6-428P-201ENST00000362942 107 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 SNORA73.2-201ENST00000364946 201 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 Y_RNA.556-201ENST00000384677 113 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 MIR325-201ENST00000385260 98 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ITGA4P13612 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.17□□□□□ -1.74
ITGA4P13612 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.17□□□□□ -1.74
ITGA4P13612 AL139247.1-201ENST00000422768 325 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.17□□□□□ -1.74
ITGA4P13612 AL358232.1-201ENST00000448030 501 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 RPS3AP46-201ENST00000448352 682 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.17□□□□□ -1.74
ITGA4P13612 AL133162.1-201ENST00000463228 453 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 MTND4LP22-201ENST00000508209 276 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 RNU1-95P-201ENST00000516357 160 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 RNA5SP164-201ENST00000516533 110 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 RNU1-128P-201ENST00000516704 160 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 RNU6-794P-201ENST00000517261 64 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.17□□□□□ -1.74
ITGA4P13612 AC008739.3-201ENST00000603262 127 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 SNORA51-201ENST00000606420 132 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 MIR8076-201ENST00000611401 83 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 U2.1-201ENST00000618978 145 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 AC099506.2-201ENST00000623074 221 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 MTND5P27-201ENST00000428871 1720 ntBASIC4.17□□□□□ -1.74
ITGA4P13612 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ITGA4P13612 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ITGA4P13612 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
ITGA4P13612 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ITGA4P13612 AC010733.2-201ENST00000589496 5702 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 MIR449B-201ENST00000384995 97 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 MIR199A2-201ENST00000385289 110 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 HMGN2P8-201ENST00000391458 268 ntBASIC4.16□□□□□ -1.74
ITGA4P13612 EIF4EP2-201ENST00000422816 654 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms