Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RPS20P20-201ENST00000460498 340 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.24□□□□□ -2.05
HOXC4P09017 ANXA2P1-201ENST00000505539 926 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC4P09017 AC009646.1-201ENST00000510455 318 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 RNU6-445P-201ENST00000516949 107 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 RNU6-840P-201ENST00000517275 65 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AC022616.3-201ENST00000523940 148 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC4P09017 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.24□□□□□ -2.05
HOXC4P09017 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.24□□□□□ -2.05
HOXC4P09017 PRELID2P1-201ENST00000552837 301 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC4P09017 MIR3146-201ENST00000580367 79 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 MIR3682-201ENST00000581338 84 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC4P09017 AC121334.2-201ENST00000605387 271 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC4P09017 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HOXC4P09017 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC4P09017 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 U4.5-201ENST00000617137 123 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC4P09017 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HOXC4P09017 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.24□□□□□ -2.05
HOXC4P09017 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HOXC4P09017 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXC4P09017 AC131280.1-202ENST00000624067 4211 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 MAPK10-266ENST00000641066 6555 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AL139276.1-201ENST00000311910 1001 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 Y_RNA.159-201ENST00000363674 87 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 RNU6-169P-201ENST00000365336 107 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
HOXC4P09017 SET-203ENST00000372688 801 ntTSL 2 BASIC2.23□□□□□ -2.05
HOXC4P09017 RNU6-217P-201ENST00000384164 104 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 MIR181A1-201ENST00000385026 110 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AC068050.1-201ENST00000394891 380 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 MRPL42P2-201ENST00000403169 426 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AL590002.1-201ENST00000406554 418 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AL513475.1-201ENST00000406602 315 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 RPS15AP12-201ENST00000419498 388 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC4P09017 MTCO2P19-201ENST00000427513 598 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 TIMM9P1-201ENST00000436122 256 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AC009296.1-201ENST00000443146 155 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 DDX3P2-201ENST00000446138 111 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 MTND4P18-201ENST00000447010 465 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC4P09017 PSPHP1-201ENST00000450062 261 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 MTCO3P38-201ENST00000468910 766 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 RPL23AP70-201ENST00000483361 460 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 FAM92A1P2-202ENST00000504766 877 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC4P09017 Vault.3-201ENST00000516676 95 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 Y_RNA.704-201ENST00000516851 102 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 RNA5SP337-201ENST00000517007 109 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC4P09017 GLYCAM1-201ENST00000546596 285 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC4P09017 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC4P09017 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.23□□□□□ -2.05
HOXC4P09017 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXC4P09017 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXC4P09017 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.23□□□□□ -2.05
HOXC4P09017 AC245014.2-201ENST00000603689 287 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AC246785.4-201ENST00000605374 287 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
HOXC4P09017 AL359880.1-201ENST00000621879 266 ntBASIC2.23□□□□□ -2.05
HOXC4P09017 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
HOXC4P09017 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXC4P09017 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.22□□□□□ -2.05
HOXC4P09017 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HOXC4P09017 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXC4P09017 Y_RNA.1-201ENST00000352915 104 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 RNU1-91P-201ENST00000364746 163 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXC4P09017 SNORA20.2-201ENST00000383922 131 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 RNU6-1103P-201ENST00000384150 107 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 Y_RNA.450-201ENST00000384198 113 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 U3.37-201ENST00000408528 213 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.22□□□□□ -2.05
HOXC4P09017 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.22□□□□□ -2.05
HOXC4P09017 MTND4LP11-201ENST00000422184 280 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 ISCA1P1-201ENST00000426679 387 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 AC133104.1-201ENST00000429100 218 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 MTND1P2-201ENST00000430604 821 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 RPL23AP30-201ENST00000432419 501 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 MTND3P21-201ENST00000433774 331 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 AC002486.1-201ENST00000435098 391 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 UBE2V1P13-201ENST00000436983 439 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 MTATP6P23-201ENST00000440153 476 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 USP9YP15-201ENST00000442391 422 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 AC096638.1-201ENST00000444678 216 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 FGF7P6-202ENST00000451282 293 ntBASIC2.22□□□□□ -2.05
HOXC4P09017 MTND1P12-201ENST00000455231 147 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms