Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 HMGB3P12-201ENST00000438745 556 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.41□□□□□ -2.18
TPM3P06753 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.41□□□□□ -2.18
TPM3P06753 AL590365.1-201ENST00000450788 243 ntBASIC1.41□□□□□ -2.18
TPM3P06753 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AC099513.1-201ENST00000490423 301 ntBASIC1.41□□□□□ -2.18
TPM3P06753 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AC027338.1-201ENST00000514840 825 ntBASIC1.41□□□□□ -2.18
TPM3P06753 RNU2-53P-201ENST00000516257 147 ntBASIC1.41□□□□□ -2.18
TPM3P06753 RNU6-572P-201ENST00000516724 80 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AC009902.1-201ENST00000519351 183 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AC021451.1-201ENST00000523498 1129 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AC090821.2-201ENST00000523552 176 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AP003392.2-201ENST00000527269 208 ntBASIC1.41□□□□□ -2.18
TPM3P06753 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.41□□□□□ -2.18
TPM3P06753 AC103987.3-201ENST00000582071 292 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AF131215.7-201ENST00000602443 707 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AC004987.4-201ENST00000603383 338 ntBASIC1.41□□□□□ -2.18
TPM3P06753 AL022345.1-201ENST00000607292 135 ntBASIC1.41□□□□□ -2.18
TPM3P06753 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TPM3P06753 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TPM3P06753 Y_RNA.111-201ENST00000363248 100 ntBASIC1.4□□□□□ -2.19
TPM3P06753 RNU6-546P-201ENST00000383991 107 ntBASIC1.4□□□□□ -2.19
TPM3P06753 SNORA48.1-201ENST00000390879 135 ntBASIC1.4□□□□□ -2.19
TPM3P06753 RNA5SP100-201ENST00000410903 110 ntBASIC1.4□□□□□ -2.19
TPM3P06753 RNA5SP59-201ENST00000410922 110 ntBASIC1.4□□□□□ -2.19
TPM3P06753 SRIP3-201ENST00000413200 219 ntBASIC1.4□□□□□ -2.19
TPM3P06753 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.4□□□□□ -2.19
TPM3P06753 HMGB1P31-201ENST00000437242 427 ntBASIC1.4□□□□□ -2.19
TPM3P06753 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.4□□□□□ -2.19
TPM3P06753 AC116337.1-201ENST00000509680 687 ntBASIC1.4□□□□□ -2.19
TPM3P06753 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.4□□□□□ -2.19
TPM3P06753 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.4□□□□□ -2.19
TPM3P06753 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.4□□□□□ -2.19
TPM3P06753 COPS8P3-201ENST00000526024 482 ntBASIC1.4□□□□□ -2.19
TPM3P06753 DEFB130C-202ENST00000530001 230 ntBASIC1.4□□□□□ -2.19
TPM3P06753 AP004247.1-201ENST00000531556 1289 ntBASIC1.4□□□□□ -2.19
TPM3P06753 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.4□□□□□ -2.19
TPM3P06753 MIR4513-201ENST00000581077 86 ntBASIC1.4□□□□□ -2.19
TPM3P06753 BNIP3P27-201ENST00000599991 412 ntBASIC1.4□□□□□ -2.19
TPM3P06753 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
TPM3P06753 AL133445.2-201ENST00000611191 527 ntBASIC1.4□□□□□ -2.19
TPM3P06753 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.4□□□□□ -2.19
TPM3P06753 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.4□□□□□ -2.19
TPM3P06753 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TPM3P06753 RNU6-439P-201ENST00000384188 106 ntBASIC1.39□□□□□ -2.19
TPM3P06753 RNU6-1274P-201ENST00000384557 107 ntBASIC1.39□□□□□ -2.19
TPM3P06753 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TPM3P06753 RNU1-78P-201ENST00000391248 165 ntBASIC1.39□□□□□ -2.19
TPM3P06753 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.39□□□□□ -2.19
TPM3P06753 MTCO2P1-201ENST00000424648 477 ntBASIC1.39□□□□□ -2.19
TPM3P06753 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.39□□□□□ -2.19
TPM3P06753 AC005094.1-201ENST00000440420 368 ntBASIC1.39□□□□□ -2.19
TPM3P06753 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.39□□□□□ -2.19
TPM3P06753 RNU1-41P-201ENST00000516161 162 ntBASIC1.39□□□□□ -2.19
TPM3P06753 RNU1-48P-201ENST00000516400 162 ntBASIC1.39□□□□□ -2.19
TPM3P06753 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.39□□□□□ -2.19
TPM3P06753 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.39□□□□□ -2.19
TPM3P06753 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.39□□□□□ -2.19
TPM3P06753 AC126365.2-201ENST00000580630 379 ntBASIC1.39□□□□□ -2.19
TPM3P06753 WISP1-OT1-201ENST00000602893 642 ntBASIC1.39□□□□□ -2.19
TPM3P06753 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.39□□□□□ -2.19
TPM3P06753 MIR8074-201ENST00000615081 81 ntBASIC1.39□□□□□ -2.19
TPM3P06753 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.39□□□□□ -2.19
TPM3P06753 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.39□□□□□ -2.19
TPM3P06753 ZNF209P-201ENST00000593450 2304 ntBASIC1.39□□□□□ -2.19
TPM3P06753 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TPM3P06753 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TPM3P06753 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.38□□□□□ -2.19
TPM3P06753 CBX3P1-201ENST00000325243 554 ntBASIC1.38□□□□□ -2.19
TPM3P06753 RNU6-1010P-201ENST00000362757 107 ntBASIC1.38□□□□□ -2.19
TPM3P06753 RNU6-288P-201ENST00000363690 104 ntBASIC1.38□□□□□ -2.19
TPM3P06753 MIR186-201ENST00000384988 86 ntBASIC1.38□□□□□ -2.19
TPM3P06753 AL603865.2-201ENST00000401679 213 ntBASIC1.38□□□□□ -2.19
TPM3P06753 FTH1P15-201ENST00000406984 280 ntBASIC1.38□□□□□ -2.19
TPM3P06753 MIR1285-1-201ENST00000408593 84 ntBASIC1.38□□□□□ -2.19
TPM3P06753 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.38□□□□□ -2.19
TPM3P06753 RPS29P28-201ENST00000446439 141 ntBASIC1.38□□□□□ -2.19
TPM3P06753 SNORD13-201ENST00000459299 104 ntBASIC1.38□□□□□ -2.19
TPM3P06753 AC109329.1-201ENST00000518744 317 ntBASIC1.38□□□□□ -2.19
TPM3P06753 AC087897.1-201ENST00000550134 156 ntBASIC1.38□□□□□ -2.19
TPM3P06753 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.38□□□□□ -2.19
TPM3P06753 AC090186.1-201ENST00000605991 572 ntBASIC1.38□□□□□ -2.19
TPM3P06753 AL050343.2-201ENST00000607338 280 ntBASIC1.38□□□□□ -2.19
TPM3P06753 AC090970.3-201ENST00000612566 866 ntBASIC1.38□□□□□ -2.19
TPM3P06753 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.38□□□□□ -2.19
TPM3P06753 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.38□□□□□ -2.19
TPM3P06753 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TPM3P06753 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TPM3P06753 MTCO1P56-201ENST00000401674 224 ntBASIC1.37□□□□□ -2.19
TPM3P06753 TIMM9P2-201ENST00000419324 266 ntBASIC1.37□□□□□ -2.19
TPM3P06753 AL592045.1-201ENST00000429867 352 ntBASIC1.37□□□□□ -2.19
TPM3P06753 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.37□□□□□ -2.19
TPM3P06753 AC017099.1-201ENST00000448261 1028 ntBASIC1.37□□□□□ -2.19
TPM3P06753 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM3P06753 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM3P06753 RNU7-59P-201ENST00000459101 61 ntBASIC1.37□□□□□ -2.19
TPM3P06753 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.37□□□□□ -2.19
TPM3P06753 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.37□□□□□ -2.19
TPM3P06753 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms