Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OR51AB1P-201ENST00000429046 620 ntBASIC0.06□□□□□ -2.4
APOBP04114 FGF7P5-201ENST00000441829 291 ntBASIC0.06□□□□□ -2.4
APOBP04114 TPMTP4-201ENST00000450749 678 ntBASIC0.06□□□□□ -2.4
APOBP04114 AL359385.1-201ENST00000456509 365 ntBASIC0.06□□□□□ -2.4
APOBP04114 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.06□□□□□ -2.4
APOBP04114 AP004371.1-201ENST00000525240 214 ntBASIC0.06□□□□□ -2.4
APOBP04114 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.06□□□□□ -2.4
APOBP04114 AC069304.3-201ENST00000603938 1084 ntBASIC0.06□□□□□ -2.4
APOBP04114 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
APOBP04114 RN7SKP142-201ENST00000411236 328 ntBASIC0.05□□□□□ -2.4
APOBP04114 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
APOBP04114 AC245102.2-201ENST00000448956 180 ntBASIC0.05□□□□□ -2.4
APOBP04114 AC134050.1-201ENST00000495088 933 ntBASIC0.05□□□□□ -2.4
APOBP04114 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.05□□□□□ -2.4
APOBP04114 AP003399.1-201ENST00000637534 361 ntBASIC0.05□□□□□ -2.4
APOBP04114 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.05□□□□□ -2.4
APOBP04114 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.05□□□□□ -2.4
APOBP04114 RPS26P55-201ENST00000471178 356 ntBASIC0.05□□□□□ -2.4
APOBP04114 AC068276.1-201ENST00000605793 379 ntBASIC0.05□□□□□ -2.4
APOBP04114 AC015726.3-201ENST00000624501 418 ntBASIC0.05□□□□□ -2.4
APOBP04114 AC116563.2-201ENST00000624751 535 ntBASIC0.05□□□□□ -2.4
APOBP04114 RNA5SP496-201ENST00000391240 109 ntBASIC0.05□□□□□ -2.4
APOBP04114 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.05□□□□□ -2.4
APOBP04114 RN7SKP287-201ENST00000516546 266 ntBASIC0.05□□□□□ -2.4
APOBP04114 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.05□□□□□ -2.4
APOBP04114 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.05□□□□□ -2.4
APOBP04114 MIR4305-201ENST00000583252 102 ntBASIC0.05□□□□□ -2.4
APOBP04114 AC104465.1-201ENST00000611365 139 ntBASIC0.05□□□□□ -2.4
APOBP04114 AL360181.4-201ENST00000621752 134 ntBASIC0.05□□□□□ -2.4
APOBP04114 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.04□□□□□ -2.4
APOBP04114 MTND4LP11-201ENST00000422184 280 ntBASIC0.04□□□□□ -2.4
APOBP04114 AC010099.3-201ENST00000423896 409 ntBASIC0.04□□□□□ -2.4
APOBP04114 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.04□□□□□ -2.4
APOBP04114 AC027119.1-201ENST00000440877 241 ntBASIC0.04□□□□□ -2.4
APOBP04114 NDUFB4P10-201ENST00000452541 359 ntBASIC0.04□□□□□ -2.4
APOBP04114 HMGB1P36-201ENST00000487709 576 ntBASIC0.04□□□□□ -2.4
APOBP04114 AC108729.1-201ENST00000487812 947 ntBASIC0.04□□□□□ -2.4
APOBP04114 AL355877.2-201ENST00000603670 358 ntBASIC0.04□□□□□ -2.4
APOBP04114 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
APOBP04114 SNORD114-31-201ENST00000363219 75 ntBASIC0.04□□□□□ -2.4
APOBP04114 BTF3P11-201ENST00000426582 477 ntBASIC0.04□□□□□ -2.4
APOBP04114 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.04□□□□□ -2.4
APOBP04114 MIR3937-201ENST00000580135 106 ntBASIC0.04□□□□□ -2.4
APOBP04114 AC106900.2-201ENST00000604994 317 ntBASIC0.04□□□□□ -2.4
APOBP04114 AL359314.1-201ENST00000616913 261 ntBASIC0.04□□□□□ -2.4
APOBP04114 ACA64.5-201ENST00000516207 127 ntBASIC0.04□□□□□ -2.4
APOBP04114 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.04□□□□□ -2.4
APOBP04114 RNU6-317P-201ENST00000384031 107 ntBASIC0.04□□□□□ -2.4
APOBP04114 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.04□□□□□ -2.4
APOBP04114 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.04□□□□□ -2.4
APOBP04114 AC244505.3-201ENST00000454598 187 ntBASIC0.04□□□□□ -2.4
APOBP04114 snoU13.9-201ENST00000458927 103 ntBASIC0.04□□□□□ -2.4
APOBP04114 RNA5SP134-201ENST00000516492 96 ntBASIC0.04□□□□□ -2.4
APOBP04114 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.04□□□□□ -2.4
APOBP04114 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.04□□□□□ -2.4
APOBP04114 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.04□□□□□ -2.4
APOBP04114 XIAPP1-201ENST00000603162 600 ntBASIC0.04□□□□□ -2.4
APOBP04114 uc_338.6-201ENST00000613544 171 ntBASIC0.04□□□□□ -2.4
APOBP04114 uc_338.17-201ENST00000619633 179 ntBASIC0.04□□□□□ -2.4
APOBP04114 RNU5E-1-201ENST00000362477 120 ntBASIC0.03□□□□□ -2.4
APOBP04114 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.03□□□□□ -2.4
APOBP04114 Y_RNA.468-201ENST00000384298 102 ntBASIC0.03□□□□□ -2.4
APOBP04114 MIR19B1-201ENST00000384829 87 ntBASIC0.03□□□□□ -2.4
APOBP04114 U3.20-201ENST00000390909 217 ntBASIC0.03□□□□□ -2.4
APOBP04114 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.03□□□□□ -2.4
APOBP04114 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.03□□□□□ -2.4
APOBP04114 AL096803.2-201ENST00000450032 677 ntBASIC0.03□□□□□ -2.4
APOBP04114 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.03□□□□□ -2.4
APOBP04114 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.03□□□□□ -2.4
APOBP04114 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.03□□□□□ -2.4
APOBP04114 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.03□□□□□ -2.4
APOBP04114 MIR5093-201ENST00000583199 100 ntBASIC0.03□□□□□ -2.4
APOBP04114 U4atac.1-201ENST00000618345 95 ntBASIC0.03□□□□□ -2.4
APOBP04114 MTND4P14-201ENST00000435799 1354 ntBASIC0.03□□□□□ -2.4
APOBP04114 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.03□□□□□ -2.4
APOBP04114 CYP2C59P-201ENST00000457790 269 ntBASIC0.03□□□□□ -2.4
APOBP04114 MTATP6P9-201ENST00000515039 680 ntBASIC0.03□□□□□ -2.4
APOBP04114 AC019131.2-201ENST00000609071 870 ntBASIC0.03□□□□□ -2.4
APOBP04114 MT-TP-201ENST00000387461 68 ntBASIC0.03□□□□□ -2.4
APOBP04114 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.03□□□□□ -2.4
APOBP04114 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.03□□□□□ -2.4
APOBP04114 NCOR1P3-201ENST00000420479 303 ntBASIC0.03□□□□□ -2.4
APOBP04114 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.03□□□□□ -2.4
APOBP04114 LDHBP3-201ENST00000514909 822 ntBASIC0.03□□□□□ -2.4
APOBP04114 AC005832.3-201ENST00000537929 631 ntBASIC0.03□□□□□ -2.4
APOBP04114 MIR378F-201ENST00000578143 78 ntBASIC0.03□□□□□ -2.4
APOBP04114 PCNAP1-202ENST00000595299 752 ntBASIC0.03□□□□□ -2.4
APOBP04114 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
APOBP04114 SNORD114-28-201ENST00000363610 72 ntBASIC0.03□□□□□ -2.41
APOBP04114 MIR493-201ENST00000385254 89 ntBASIC0.03□□□□□ -2.41
APOBP04114 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.03□□□□□ -2.41
APOBP04114 AL135790.2-201ENST00000437701 267 ntBASIC0.03□□□□□ -2.41
APOBP04114 BET1P1-201ENST00000482276 359 ntBASIC0.03□□□□□ -2.41
APOBP04114 AC025465.4-201ENST00000513422 638 ntBASIC0.03□□□□□ -2.41
APOBP04114 AC112206.3-201ENST00000514578 389 ntBASIC0.03□□□□□ -2.41
APOBP04114 SCARNA16.5-201ENST00000517114 183 ntBASIC0.03□□□□□ -2.41
APOBP04114 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
APOBP04114 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.03□□□□□ -2.41
APOBP04114 AC010900.2-201ENST00000604508 210 ntBASIC0.03□□□□□ -2.41
APOBP04114 RNU6-629P-201ENST00000384061 103 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms