Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
SPTA1P02549 RNU6-31P-201ENST00000384388 108 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 MIR325-201ENST00000385260 98 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AL606490.4-201ENST00000423117 127 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTA1P02549 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTA1P02549 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTA1P02549 RSU1P2-202ENST00000437884 485 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AC114982.1-201ENST00000469402 321 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AC104689.1-201ENST00000473356 768 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AC113398.2-201ENST00000507630 558 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SPTA1P02549 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.35□□□□□ -2.35
SPTA1P02549 MIR3126-201ENST00000577443 74 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AC008945.2-201ENST00000606056 604 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.35□□□□□ -2.35
SPTA1P02549 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SPTA1P02549 MTND4P8-201ENST00000514997 1362 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AC008163.1-202ENST00000636004 2889 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 RNU4-67P-201ENST00000364569 141 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 SNORA40.19-201ENST00000390846 128 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AL031577.2-201ENST00000404133 280 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.35□□□□□ -2.35
SPTA1P02549 RSL24D1P8-201ENST00000434442 492 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 PRPS1P1-201ENST00000445305 876 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.35□□□□□ -2.35
SPTA1P02549 RNA5SP112-201ENST00000515937 99 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 MIR892C-201ENST00000516410 77 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.35□□□□□ -2.35
SPTA1P02549 AC068276.1-201ENST00000605793 379 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AP002826.1-201ENST00000608835 315 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
SPTA1P02549 AC012676.2-201ENST00000619258 186 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 AC007490.1-201ENST00000624321 703 ntBASIC0.35□□□□□ -2.35
SPTA1P02549 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.35□□□□□ -2.35
SPTA1P02549 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.34□□□□□ -2.35
SPTA1P02549 Y_RNA.25-201ENST00000362528 102 ntBASIC0.34□□□□□ -2.35
SPTA1P02549 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.35
SPTA1P02549 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.35
SPTA1P02549 MIR153-2-201ENST00000385225 87 ntBASIC0.34□□□□□ -2.35
SPTA1P02549 RPS15AP5-201ENST00000436276 388 ntBASIC0.34□□□□□ -2.35
SPTA1P02549 AL353706.1-201ENST00000436728 494 ntBASIC0.34□□□□□ -2.35
SPTA1P02549 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.34□□□□□ -2.35
SPTA1P02549 Y_RNA.654-201ENST00000497848 106 ntBASIC0.34□□□□□ -2.35
SPTA1P02549 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
SPTA1P02549 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.34□□□□□ -2.35
SPTA1P02549 AC040174.2-201ENST00000602701 465 ntBASIC0.34□□□□□ -2.35
SPTA1P02549 AP003973.1-201ENST00000604639 691 ntBASIC0.34□□□□□ -2.35
SPTA1P02549 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.34□□□□□ -2.35
SPTA1P02549 MTND5P31-201ENST00000419366 1374 ntBASIC0.34□□□□□ -2.35
SPTA1P02549 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
SPTA1P02549 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
SPTA1P02549 MIR26B-201ENST00000362251 77 ntBASIC0.34□□□□□ -2.36
SPTA1P02549 RNU6-251P-201ENST00000363235 104 ntBASIC0.34□□□□□ -2.36
SPTA1P02549 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SPTA1P02549 AC023141.4-201ENST00000412031 328 ntBASIC0.34□□□□□ -2.36
SPTA1P02549 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTA1P02549 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.34□□□□□ -2.36
SPTA1P02549 PRELID3BP1-201ENST00000457142 540 ntBASIC0.34□□□□□ -2.36
SPTA1P02549 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTA1P02549 HMGB1P35-201ENST00000503360 598 ntBASIC0.34□□□□□ -2.36
SPTA1P02549 AC105224.1-201ENST00000587055 421 ntBASIC0.34□□□□□ -2.36
SPTA1P02549 AL138478.1-201ENST00000612252 832 ntBASIC0.34□□□□□ -2.36
SPTA1P02549 AL138726.1-201ENST00000614873 333 ntBASIC0.34□□□□□ -2.36
SPTA1P02549 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.34□□□□□ -2.36
SPTA1P02549 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
SPTA1P02549 RNA5SP98-201ENST00000363158 137 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 RNU6-112P-201ENST00000363599 104 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 RNU6-271P-201ENST00000363858 105 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 RNU6-26P-201ENST00000383985 107 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 SNORA51.10-201ENST00000384418 136 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 RPS15AP38-201ENST00000413110 372 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.33□□□□□ -2.36
SPTA1P02549 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.33□□□□□ -2.36
SPTA1P02549 Y_RNA.644-201ENST00000459006 113 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.33□□□□□ -2.36
SPTA1P02549 AC112206.3-201ENST00000514578 389 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 RNA5SP165-201ENST00000517142 115 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC008562.1-201ENST00000521763 330 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AP006587.4-201ENST00000526053 529 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC019288.1-201ENST00000557918 224 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC023158.1-201ENST00000561632 1025 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC008498.1-201ENST00000613012 531 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC007792.1-201ENST00000623023 402 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 Y_RNA.67-201ENST00000362870 100 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
SPTA1P02549 RNU6-1126P-201ENST00000384002 107 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC009310.1-201ENST00000414414 451 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 EIF4EP2-201ENST00000422816 654 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.33□□□□□ -2.36
SPTA1P02549 AC013267.1-201ENST00000458227 267 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AL049714.1-201ENST00000466686 347 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 SCARNA16.2-201ENST00000516520 172 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.33□□□□□ -2.36
SPTA1P02549 AC004812.1-201ENST00000540773 146 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC125611.1-201ENST00000549563 229 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC004817.2-201ENST00000561794 651 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.33□□□□□ -2.36
SPTA1P02549 BNIP3P25-201ENST00000596023 559 ntBASIC0.33□□□□□ -2.36
SPTA1P02549 AC009233.1-201ENST00000616477 371 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms