Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AP000568.1-201ENST00000282964 442 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 RNU6-61P-201ENST00000365528 109 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 SNORA6-201ENST00000384033 151 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 RNU6-297P-201ENST00000384636 107 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 SNORA40.3-201ENST00000390964 122 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 SNORA26.8-201ENST00000391306 124 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AL355497.1-201ENST00000406262 551 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 U6atac.2-201ENST00000408644 118 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 NPM1P11-201ENST00000417106 855 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC009518.2-201ENST00000418056 731 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC097463.2-201ENST00000421074 142 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 ISCA1P6-201ENST00000427740 390 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 MED13P1-201ENST00000428342 171 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 CALM2P2-201ENST00000428512 440 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 IPO7P1-201ENST00000442031 636 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 GAPDHP17-201ENST00000449858 1001 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 MTCYBP1-201ENST00000454315 1119 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC112771.1-201ENST00000463581 102 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 KLF3P2-201ENST00000465138 268 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 MTND3P7-201ENST00000474435 343 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 RPL23AP49-201ENST00000492925 468 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC117522.1-201ENST00000509821 380 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC112206.3-201ENST00000514578 389 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 MTCYBP20-201ENST00000524239 1129 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 DUXAP5-201ENST00000529668 529 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 CBX3P7-201ENST00000532876 502 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC105245.1-201ENST00000581934 244 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AF131215.7-201ENST00000602443 707 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC090578.1-201ENST00000604955 591 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AL033523.1-201ENST00000605153 153 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC026790.2-201ENST00000606282 430 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC005332.10-201ENST00000612725 619 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC024581.2-201ENST00000619986 252 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC138627.2-201ENST00000624202 601 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AL157786.1-207ENST00000627771 695 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AC110994.2-201ENST00000635481 492 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AL136360.1-201ENST00000503377 1900 ntBASIC1.67□□□□□ -2.14
HLA-DQA1P01909 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DQA1P01909 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RNU6-486P-201ENST00000363116 107 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RNY1P12-201ENST00000364251 105 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 MIR578-201ENST00000384828 96 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL359511.1-201ENST00000402970 211 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RNU2-8P-201ENST00000410727 190 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 Y_RNA.623-201ENST00000411128 95 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 HMGN1P14-201ENST00000412459 517 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL365338.1-201ENST00000422282 858 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC236972.1-201ENST00000433225 199 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RPS15AP28-201ENST00000435088 386 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC009961.2-201ENST00000435771 251 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC003071.1-201ENST00000451219 789 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC080013.2-201ENST00000460866 323 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RPL7P43-201ENST00000478876 753 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RPS27P21-201ENST00000486977 252 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC026436.1-201ENST00000510537 270 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RNA5SP112-201ENST00000515937 99 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 RNA5SP320-201ENST00000516263 124 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC090572.1-201ENST00000519251 160 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC234778.2-201ENST00000566241 354 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL670379.10-201ENST00000604330 253 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL670379.9-201ENST00000605428 253 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC087045.1-201ENST00000605856 382 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AL139286.2-201ENST00000606838 396 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 AC019226.2-201ENST00000625973 424 ntBASIC1.66□□□□□ -2.14
HLA-DQA1P01909 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DQA1P01909 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms