Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MAPK10-266ENST00000641066 6555 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AC103988.1-201ENST00000566382 2177 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CLDN1O95832 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CLDN1O95832 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CLDN1O95832 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN1O95832 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN1O95832 OR4G1P-203ENST00000641984 1631 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 RNU6-1287P-201ENST00000362914 107 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 Y_RNA.157-201ENST00000363638 102 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 RNU6-288P-201ENST00000363690 104 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 Y_RNA.231-201ENST00000364358 102 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 RNY3P14-201ENST00000384309 102 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 RNU6-1127P-201ENST00000384580 107 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 RNU6-1060P-201ENST00000384664 107 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 SNORA46-201ENST00000384762 135 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 CISD1P1-201ENST00000393907 327 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 AL592114.1-201ENST00000403842 483 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.62□□□□□ -1.99
CLDN1O95832 MTND4LP11-201ENST00000422184 280 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.62□□□□□ -1.99
CLDN1O95832 MTCO2P3-201ENST00000442543 421 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 FABP5P13-201ENST00000452144 328 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 SNRPFP3-201ENST00000457792 225 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 RN7SL75P-201ENST00000461926 281 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN1O95832 CCDC34P1-201ENST00000507441 517 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN1O95832 AC074344.1-201ENST00000512823 224 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 RN7SKP282-201ENST00000516824 299 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 RNU6-1315P-201ENST00000517187 99 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.62□□□□□ -1.99
CLDN1O95832 AF235103.2-201ENST00000525753 346 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN1O95832 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
CLDN1O95832 AL138889.2-201ENST00000603883 242 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.62□□□□□ -1.99
CLDN1O95832 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
CLDN1O95832 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
CLDN1O95832 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN1O95832 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLDN1O95832 AC009487.2-201ENST00000420969 6821 ntBASIC2.62□□□□□ -1.99
CLDN1O95832 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN1O95832 RNU6-522P-201ENST00000364497 107 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 RNU6-217P-201ENST00000384164 104 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN1O95832 RNU6-373P-201ENST00000411247 98 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN1O95832 TOMM20P4-201ENST00000427861 435 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 AL669831.1-202ENST00000428504 417 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 AL592045.1-201ENST00000429867 352 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 GTF2IP13-201ENST00000438487 386 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 MTND4P25-201ENST00000441039 533 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 PIGFP3-201ENST00000441918 722 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 ANXA2P1-201ENST00000505539 926 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 SNORA20.3-201ENST00000516880 132 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 RNA5SP291-201ENST00000517222 105 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 AP001804.3-201ENST00000525146 880 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLDN1O95832 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.61□□□□□ -1.99
CLDN1O95832 AMZ2P1-203ENST00000565833 850 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 MIR5583-1-201ENST00000580941 59 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 AC010525.2-201ENST00000590920 195 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 BNIP3P9-201ENST00000603714 553 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
CLDN1O95832 uc_338.34-201ENST00000617467 174 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 AC027309.3-201ENST00000623419 351 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 AC064859.1-201ENST00000624741 174 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN1O95832 CUL1P1-201ENST00000509510 2425 ntBASIC2.61□□□□□ -1.99
CLDN1O95832 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN1O95832 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN1O95832 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN1O95832 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN1O95832 Y_RNA.167-201ENST00000363735 109 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 RNU6-512P-201ENST00000364438 103 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 Y_RNA.245-201ENST00000364493 95 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 Y_RNA.303-201ENST00000364998 94 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 Y_RNA.399-201ENST00000383955 105 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 RNU6-851P-201ENST00000384565 107 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 MIR34A-201ENST00000385130 110 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN1O95832 AL356776.1-201ENST00000406574 447 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 AL606923.1-201ENST00000406616 190 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN1O95832 AL592148.1-201ENST00000413568 445 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.6□□□□□ -1.99
CLDN1O95832 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 ARL5AP4-201ENST00000430731 512 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 AL512844.2-201ENST00000433990 593 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 AC244505.4-201ENST00000434905 287 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 SSXP5-201ENST00000443473 287 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 RPS15AP27-201ENST00000449183 343 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN1O95832 MTND3P16-201ENST00000452205 344 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN1O95832 snoU13.15-201ENST00000459407 104 ntBASIC2.6□□□□□ -1.99
CLDN1O95832 AC104472.2-201ENST00000469035 601 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms