Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Z99571.1-201ENST00000636677 394 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 AC058791.1-201ENST00000608412 3198 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP4O75379 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP4O75379 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP4O75379 Y_RNA.2-201ENST00000362330 96 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 RNU6-596P-201ENST00000365395 98 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 Y_RNA.428-201ENST00000384078 102 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 Y_RNA.452-201ENST00000384202 108 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 RNU6-574P-201ENST00000384265 107 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 RNU6-306P-201ENST00000384617 107 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 RNU6-55P-201ENST00000411092 107 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 AC017083.1-201ENST00000428093 483 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 HMGB1P9-201ENST00000429856 646 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 RNU7-187P-201ENST00000458985 68 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 HMGB1P22-201ENST00000505315 124 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 AC022493.2-201ENST00000506122 481 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.36□□□□□ -1.71
VAMP4O75379 SCARNA16.2-201ENST00000516520 172 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 RNA5SP384-201ENST00000516615 116 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 RNU6-1315P-201ENST00000517187 99 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 GNAI2P1-201ENST00000541815 315 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.36□□□□□ -1.71
VAMP4O75379 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.36□□□□□ -1.71
VAMP4O75379 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.36□□□□□ -1.71
VAMP4O75379 AC098826.3-201ENST00000603823 466 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 AC019176.2-201ENST00000611579 315 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 RMST_4.1-201ENST00000616886 107 ntBASIC4.36□□□□□ -1.71
VAMP4O75379 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP4O75379 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VAMP4O75379 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
VAMP4O75379 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
VAMP4O75379 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.35□□□□□ -1.71
VAMP4O75379 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VAMP4O75379 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VAMP4O75379 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VAMP4O75379 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.35□□□□□ -1.71
VAMP4O75379 RNU6-600P-201ENST00000362524 99 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 RNU6-1167P-201ENST00000363227 94 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 RNU6-335P-201ENST00000364563 113 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 Y_RNA.324-201ENST00000365165 102 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VAMP4O75379 RNU6-842P-201ENST00000384269 107 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AL592045.1-201ENST00000429867 352 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.35□□□□□ -1.71
VAMP4O75379 CYCSP35-201ENST00000451978 304 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 RPL12P25-201ENST00000455592 494 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 snoU13.24-201ENST00000458998 104 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 RPL21P104-201ENST00000464143 478 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AC128713.1-201ENST00000471495 306 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AC021205.2-201ENST00000480069 347 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 RPL31P13-201ENST00000484151 370 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AC022493.1-201ENST00000492984 337 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.35□□□□□ -1.71
VAMP4O75379 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.35□□□□□ -1.71
VAMP4O75379 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.35□□□□□ -1.71
VAMP4O75379 SCARNA15.2-201ENST00000516409 127 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 RNA5SP471-201ENST00000516971 106 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 RNU6-264P-201ENST00000517134 104 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 SNORD116.3-201ENST00000517176 78 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 IGKV2-23-201ENST00000518729 323 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.35□□□□□ -1.71
VAMP4O75379 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.35□□□□□ -1.71
VAMP4O75379 MIR3921-201ENST00000577308 85 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 MIR3149-201ENST00000584629 83 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 OR1M4P-201ENST00000589199 287 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AC005014.2-201ENST00000607795 599 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AL591516.1-201ENST00000611326 274 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AL360181.4-201ENST00000621752 134 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.35□□□□□ -1.71
VAMP4O75379 Z69720.2-201ENST00000624755 279 ntBASIC4.35□□□□□ -1.71
VAMP4O75379 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.35□□□□□ -1.71
VAMP4O75379 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VAMP4O75379 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VAMP4O75379 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.34□□□□□ -1.71
VAMP4O75379 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VAMP4O75379 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VAMP4O75379 MIR30E-201ENST00000362104 92 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 Y_RNA.151-201ENST00000363566 112 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VAMP4O75379 MIR517A-201ENST00000385001 87 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 AC243428.1-201ENST00000421099 264 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 AL159169.1-201ENST00000421119 127 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.34□□□□□ -1.71
VAMP4O75379 AC011816.1-201ENST00000441346 546 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.34□□□□□ -1.71
VAMP4O75379 RPS24P6-201ENST00000452670 400 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 GSTA11P-201ENST00000452866 669 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 PCMTD1P1-201ENST00000455560 355 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 AC091153.1-201ENST00000466297 402 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.34□□□□□ -1.71
VAMP4O75379 FCF1P8-201ENST00000510322 597 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.34□□□□□ -1.71
VAMP4O75379 SUB1P3-201ENST00000564581 315 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.34□□□□□ -1.71
VAMP4O75379 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.34□□□□□ -1.71
VAMP4O75379 AC002545.1-201ENST00000592511 181 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.34□□□□□ -1.71
VAMP4O75379 SNRPGP15-201ENST00000600149 222 ntBASIC4.34□□□□□ -1.71
VAMP4O75379 7SK.7-201ENST00000603504 247 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms