Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC130454.1-201ENST00000622948 401 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 AC006484.1-201ENST00000435086 1884 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 MARK2P15-201ENST00000432204 2186 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PTCD1O75127 DDX18P3-201ENST00000404856 2007 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCD1O75127 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCD1O75127 Y_RNA.65-201ENST00000362846 100 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 RNY1-201ENST00000364228 113 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 RNU2-71P-201ENST00000411395 189 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 AL035423.1-201ENST00000420331 213 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 EIF4EP2-201ENST00000422816 654 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 NDUFB4P7-201ENST00000423198 363 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 AL591419.1-201ENST00000427423 339 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 MTND3P9-201ENST00000429526 346 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 KC877373.1-201ENST00000479066 408 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 UBE2CP3-201ENST00000502715 450 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCD1O75127 SNORA31.19-201ENST00000517079 126 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCD1O75127 MIR3922-201ENST00000585192 84 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 AC244505.7-201ENST00000599675 272 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 AC006557.5-201ENST00000603126 811 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.05□□□□□ -1.6
PTCD1O75127 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCD1O75127 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD1O75127 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD1O75127 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCD1O75127 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD1O75127 MIR34A-201ENST00000385130 110 ntBASIC5.04□□□□□ -1.6
PTCD1O75127 RNU6-130P-201ENST00000411112 103 ntBASIC5.04□□□□□ -1.6
PTCD1O75127 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCD1O75127 MTCO3P29-201ENST00000432119 779 ntBASIC5.04□□□□□ -1.6
PTCD1O75127 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCD1O75127 Y_RNA.683-201ENST00000516508 93 ntBASIC5.04□□□□□ -1.6
PTCD1O75127 RNA5SP165-201ENST00000517142 115 ntBASIC5.04□□□□□ -1.6
PTCD1O75127 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCD1O75127 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.04□□□□□ -1.6
PTCD1O75127 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCD1O75127 AL390123.1-201ENST00000603216 237 ntBASIC5.04□□□□□ -1.6
PTCD1O75127 AC090132.2-201ENST00000615881 347 ntBASIC5.04□□□□□ -1.6
PTCD1O75127 AC131238.1-201ENST00000617135 328 ntBASIC5.04□□□□□ -1.6
PTCD1O75127 U6.104-201ENST00000637979 90 ntBASIC5.04□□□□□ -1.6
PTCD1O75127 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD1O75127 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD1O75127 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCD1O75127 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
PTCD1O75127 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCD1O75127 AL161912.2-201ENST00000565707 3007 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCD1O75127 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PTCD1O75127 RNU6-595P-201ENST00000363944 107 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 Y_RNA.237-201ENST00000364439 102 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 Y_RNA.269-201ENST00000364685 89 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 MIR215-201ENST00000384858 110 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 SNORD58.1-201ENST00000391313 66 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 HDGFP1-201ENST00000405943 252 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 AL139156.1-201ENST00000412785 841 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 AL117339.3-201ENST00000418733 162 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCD1O75127 AL590383.1-201ENST00000428602 75 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCD1O75127 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCD1O75127 AL133162.1-201ENST00000463228 453 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCD1O75127 AC104619.4-201ENST00000510773 249 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 RNU6-572P-201ENST00000516724 80 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 AC022695.1-201ENST00000522089 237 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 IGKV2D-19-201ENST00000523346 262 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.03□□□□□ -1.6
PTCD1O75127 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCD1O75127 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.03□□□□□ -1.6
PTCD1O75127 AL645944.1-201ENST00000603857 493 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCD1O75127 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCD1O75127 AL159153.1-201ENST00000619688 317 ntBASIC5.03□□□□□ -1.6
PTCD1O75127 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCD1O75127 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.03□□□□□ -1.6
PTCD1O75127 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTCD1O75127 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.03□□□□□ -1.6
PTCD1O75127 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
PTCD1O75127 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PTCD1O75127 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PTCD1O75127 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTCD1O75127 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PTCD1O75127 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
PTCD1O75127 RNU6-428P-201ENST00000362942 107 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 Y_RNA.81-201ENST00000362997 102 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 RNU6-741P-201ENST00000383889 107 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 AL603910.2-201ENST00000407268 136 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 MIR548H3-201ENST00000408771 118 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 RNU6-1203P-201ENST00000410703 110 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 RNU2-25P-201ENST00000411041 191 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 RPS29P4-201ENST00000414733 161 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 AC004383.1-201ENST00000438135 289 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 AL451050.1-201ENST00000450126 415 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 RPL21P11-201ENST00000461458 483 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.02□□□□□ -1.61
PTCD1O75127 AC074198.2-201ENST00000508153 258 ntBASIC5.02□□□□□ -1.61
PTCD1O75127 RNU6-612P-201ENST00000516909 102 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms