Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC093331.1-201ENST00000521474 169 ntBASIC2.83□□□□□ -1.96
LMX1BO60663 AL451007.1-201ENST00000595491 289 ntBASIC2.83□□□□□ -1.96
LMX1BO60663 AC073539.2-201ENST00000597113 165 ntBASIC2.83□□□□□ -1.96
LMX1BO60663 BDH2P1-201ENST00000602288 736 ntBASIC2.83□□□□□ -1.96
LMX1BO60663 AC078795.3-201ENST00000602913 472 ntBASIC2.83□□□□□ -1.96
LMX1BO60663 AL137843.1-201ENST00000605078 385 ntBASIC2.83□□□□□ -1.96
LMX1BO60663 AC098657.3-201ENST00000620434 263 ntBASIC2.83□□□□□ -1.96
LMX1BO60663 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LMX1BO60663 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
LMX1BO60663 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.83□□□□□ -1.96
LMX1BO60663 AC005183.1-201ENST00000603687 1979 ntBASIC2.83□□□□□ -1.96
LMX1BO60663 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.83□□□□□ -1.96
LMX1BO60663 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
LMX1BO60663 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LMX1BO60663 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
LMX1BO60663 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LMX1BO60663 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
LMX1BO60663 MIR369-201ENST00000362155 70 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RNA5SP383-201ENST00000362934 120 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RNU6-1303P-201ENST00000364841 107 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 SNORA4.3-201ENST00000365564 137 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 Y_RNA.395-201ENST00000383945 109 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RNU6-434P-201ENST00000384376 107 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AL360182.1-201ENST00000397433 468 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RPL5P18-201ENST00000406671 891 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.82□□□□□ -1.96
LMX1BO60663 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.82□□□□□ -1.96
LMX1BO60663 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.82□□□□□ -1.96
LMX1BO60663 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.82□□□□□ -1.96
LMX1BO60663 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.82□□□□□ -1.96
LMX1BO60663 AL121871.1-201ENST00000443413 436 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AL360271.2-201ENST00000447710 161 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RPL21P41-201ENST00000459863 264 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RPL27AP5-201ENST00000469428 449 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AC010285.1-201ENST00000470580 392 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RPL7P5-201ENST00000471472 736 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 UBE2DNL-203ENST00000474922 222 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AC008526.1-201ENST00000509149 338 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 APOOP4-201ENST00000513530 597 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RN7SKP24-201ENST00000515888 284 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RNU6-927P-201ENST00000516199 100 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RNA5SP471-201ENST00000516971 106 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.82□□□□□ -1.96
LMX1BO60663 AC068657.1-201ENST00000520807 306 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.82□□□□□ -1.96
LMX1BO60663 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.82□□□□□ -1.96
LMX1BO60663 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.82□□□□□ -1.96
LMX1BO60663 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.82□□□□□ -1.96
LMX1BO60663 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.82□□□□□ -1.96
LMX1BO60663 IMMP1LP2-201ENST00000552954 492 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.82□□□□□ -1.96
LMX1BO60663 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.82□□□□□ -1.96
LMX1BO60663 MIR4790-201ENST00000577799 79 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.82□□□□□ -1.96
LMX1BO60663 MIR5004-201ENST00000579078 107 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 MIR3171-201ENST00000584270 74 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LMX1BO60663 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.82□□□□□ -1.96
LMX1BO60663 AC012119.1-201ENST00000603184 222 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AL080274.1-201ENST00000605565 220 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AC034102.8-201ENST00000615146 484 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AC022418.1-201ENST00000624118 445 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 AC073476.4-201ENST00000628409 72 ntBASIC2.82□□□□□ -1.96
LMX1BO60663 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LMX1BO60663 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.82□□□□□ -1.96
LMX1BO60663 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.82□□□□□ -1.96
LMX1BO60663 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.82□□□□□ -1.96
LMX1BO60663 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LMX1BO60663 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
LMX1BO60663 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
LMX1BO60663 RNU6-1188P-201ENST00000363795 107 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 MIR578-201ENST00000384828 96 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 SNORA75.4-201ENST00000391278 119 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 MIR548P-201ENST00000408336 84 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
LMX1BO60663 RNA5SP111-201ENST00000411386 101 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 RPL37P10-201ENST00000412884 288 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.81□□□□□ -1.96
LMX1BO60663 AC063979.1-201ENST00000415539 377 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.81□□□□□ -1.96
LMX1BO60663 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.81□□□□□ -1.96
LMX1BO60663 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.81□□□□□ -1.96
LMX1BO60663 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.81□□□□□ -1.96
LMX1BO60663 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.81□□□□□ -1.96
LMX1BO60663 AC107399.1-201ENST00000451226 265 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.81□□□□□ -1.96
LMX1BO60663 AC087588.1-201ENST00000462203 316 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 S100A11P2-201ENST00000467589 312 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 AC108860.1-201ENST00000484521 383 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 AC078918.1-201ENST00000498515 228 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.81□□□□□ -1.96
LMX1BO60663 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.81□□□□□ -1.96
LMX1BO60663 AC104136.1-201ENST00000512969 394 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 RNA5SP217-201ENST00000515959 91 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 RNA5SP341-201ENST00000516261 117 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 RNU6-840P-201ENST00000517275 65 ntBASIC2.81□□□□□ -1.96
LMX1BO60663 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.81□□□□□ -1.96
LMX1BO60663 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms