Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 Y_RNA.668-201ENST00000516233 93 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.58□□□□□ -1.68
GRIN3BO60391 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.58□□□□□ -1.68
GRIN3BO60391 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.58□□□□□ -1.68
GRIN3BO60391 AC078938.1-201ENST00000620993 318 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.58□□□□□ -1.68
GRIN3BO60391 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GRIN3BO60391 AC118273.1-201ENST00000525324 3006 ntBASIC4.58□□□□□ -1.68
GRIN3BO60391 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GRIN3BO60391 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GRIN3BO60391 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
GRIN3BO60391 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.57□□□□□ -1.68
GRIN3BO60391 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
GRIN3BO60391 ZNF826P-207ENST00000622273 1910 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 Y_RNA.153-201ENST00000363615 91 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 SNORA5B-201ENST00000363786 132 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 Z85995.1-201ENST00000415547 335 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 OOSP1P1-201ENST00000423265 274 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 HLA-N-201ENST00000437516 135 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.57□□□□□ -1.68
GRIN3BO60391 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.57□□□□□ -1.68
GRIN3BO60391 AC073587.1-201ENST00000447093 876 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 AL359273.1-201ENST00000510918 627 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 AP002404.1-201ENST00000532005 451 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 MED28P6-201ENST00000558776 231 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 MIR5680-201ENST00000577577 84 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.57□□□□□ -1.68
GRIN3BO60391 AP000787.2-201ENST00000604432 568 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 MIR7106-201ENST00000612419 65 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 SNORD39.4-201ENST00000620099 78 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.57□□□□□ -1.68
GRIN3BO60391 AL606534.2-204ENST00000635008 178 ntBASIC4.57□□□□□ -1.68
GRIN3BO60391 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.57□□□□□ -1.68
GRIN3BO60391 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
GRIN3BO60391 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.57□□□□□ -1.68
GRIN3BO60391 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.57□□□□□ -1.68
GRIN3BO60391 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
GRIN3BO60391 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GRIN3BO60391 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GRIN3BO60391 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
GRIN3BO60391 AC139713.2-215ENST00000641428 5037 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GRIN3BO60391 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GRIN3BO60391 AC010733.2-201ENST00000589496 5702 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GRIN3BO60391 MIR412-201ENST00000362142 91 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 RNU2-23P-201ENST00000410545 195 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GRIN3BO60391 EI24P1-201ENST00000416584 867 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 AL096701.2-201ENST00000416920 238 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GRIN3BO60391 AL356867.1-201ENST00000429623 299 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 MYL8P-204ENST00000431574 518 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 AC006028.1-201ENST00000438379 402 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 NDUFB1P2-201ENST00000449477 176 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 FABP5P15-201ENST00000453566 214 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GRIN3BO60391 AC112492.4-201ENST00000456549 352 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 RPL7P5-201ENST00000471472 736 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 AC022795.1-201ENST00000473808 480 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 AC104564.1-201ENST00000493028 407 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 RN7SL504P-201ENST00000494496 287 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 RNU4-77P-201ENST00000516692 156 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 RNU6-789P-201ENST00000517105 102 ntBASIC4.56□□□□□ -1.68
GRIN3BO60391 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.56□□□□□ -1.68
GRIN3BO60391 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.56□□□□□ -1.68
GRIN3BO60391 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
GRIN3BO60391 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GRIN3BO60391 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.55□□□□□ -1.68
GRIN3BO60391 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.55□□□□□ -1.68
GRIN3BO60391 Y_RNA.39-201ENST00000362620 98 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 Y_RNA.574-201ENST00000384766 95 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 AL158071.1-201ENST00000430315 461 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 ARL5AP4-201ENST00000430731 512 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.55□□□□□ -1.68
GRIN3BO60391 AL645939.1-201ENST00000453429 797 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 RPL23AP31-201ENST00000456160 467 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 RPL9P32-201ENST00000464118 620 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.55□□□□□ -1.68
GRIN3BO60391 RPL17P19-201ENST00000489069 552 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 AL160314.1-201ENST00000490836 438 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.55□□□□□ -1.68
GRIN3BO60391 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.55□□□□□ -1.68
GRIN3BO60391 MRPS35P2-201ENST00000508242 191 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 AC113155.1-201ENST00000511141 769 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 IGKV2D-23-201ENST00000518179 286 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.55□□□□□ -1.68
GRIN3BO60391 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.55□□□□□ -1.68
GRIN3BO60391 MIR5004-201ENST00000579078 107 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 CPDP1-201ENST00000579660 283 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 AC064801.1-201ENST00000612025 407 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 AC107871.2-201ENST00000612894 502 ntBASIC4.55□□□□□ -1.68
GRIN3BO60391 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
GRIN3BO60391 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
GRIN3BO60391 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.55□□□□□ -1.68
GRIN3BO60391 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GRIN3BO60391 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GRIN3BO60391 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.54□□□□□ -1.68
GRIN3BO60391 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms