Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.08□□□□□ -1.92
LDB2O43679 PIGFP3-201ENST00000441918 722 ntBASIC3.08□□□□□ -1.92
LDB2O43679 GPM6BP1-201ENST00000446387 144 ntBASIC3.08□□□□□ -1.92
LDB2O43679 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.08□□□□□ -1.92
LDB2O43679 KC877373.1-201ENST00000479066 408 ntBASIC3.08□□□□□ -1.92
LDB2O43679 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB2O43679 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB2O43679 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB2O43679 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.08□□□□□ -1.92
LDB2O43679 SNORA14.1-201ENST00000516113 141 ntBASIC3.08□□□□□ -1.92
LDB2O43679 Y_RNA.675-201ENST00000516389 149 ntBASIC3.08□□□□□ -1.92
LDB2O43679 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB2O43679 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB2O43679 AP003122.3-201ENST00000526316 255 ntBASIC3.08□□□□□ -1.92
LDB2O43679 AC084851.1-201ENST00000529105 249 ntBASIC3.08□□□□□ -1.92
LDB2O43679 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.08□□□□□ -1.92
LDB2O43679 AL157871.3-201ENST00000557231 293 ntBASIC3.08□□□□□ -1.92
LDB2O43679 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.08□□□□□ -1.92
LDB2O43679 MIR3942-201ENST00000585264 109 ntBASIC3.08□□□□□ -1.92
LDB2O43679 AC012119.1-201ENST00000603184 222 ntBASIC3.08□□□□□ -1.92
LDB2O43679 AC104237.2-201ENST00000612456 443 ntBASIC3.08□□□□□ -1.92
LDB2O43679 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB2O43679 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LDB2O43679 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LDB2O43679 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.08□□□□□ -1.92
LDB2O43679 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
LDB2O43679 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LDB2O43679 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LDB2O43679 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LDB2O43679 AC090740.1-201ENST00000623193 2262 ntBASIC3.07□□□□□ -1.92
LDB2O43679 AL359693.1-201ENST00000614959 2407 ntBASIC3.07□□□□□ -1.92
LDB2O43679 Y_RNA.301-201ENST00000364990 103 ntBASIC3.07□□□□□ -1.92
LDB2O43679 SNORA54-201ENST00000384281 123 ntBASIC3.07□□□□□ -1.92
LDB2O43679 MIR578-201ENST00000384828 96 ntBASIC3.07□□□□□ -1.92
LDB2O43679 RNU6-1197P-201ENST00000391183 107 ntBASIC3.07□□□□□ -1.92
LDB2O43679 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
LDB2O43679 RPS4XP7-201ENST00000406274 780 ntBASIC3.07□□□□□ -1.92
LDB2O43679 U3.42-201ENST00000408746 214 ntBASIC3.07□□□□□ -1.92
LDB2O43679 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB2O43679 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.07□□□□□ -1.92
LDB2O43679 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.07□□□□□ -1.92
LDB2O43679 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB2O43679 NDUFB4P6-201ENST00000436819 366 ntBASIC3.07□□□□□ -1.92
LDB2O43679 Z82210.1-201ENST00000440037 231 ntBASIC3.07□□□□□ -1.92
LDB2O43679 AL360271.2-201ENST00000447710 161 ntBASIC3.07□□□□□ -1.92
LDB2O43679 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB2O43679 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
LDB2O43679 MTCO1P29-201ENST00000496868 288 ntBASIC3.07□□□□□ -1.92
LDB2O43679 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.07□□□□□ -1.92
LDB2O43679 CYCSP27-201ENST00000527643 293 ntBASIC3.07□□□□□ -1.92
LDB2O43679 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB2O43679 GLYCAM1-201ENST00000546596 285 ntBASIC3.07□□□□□ -1.92
LDB2O43679 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB2O43679 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.07□□□□□ -1.92
LDB2O43679 MIR4795-201ENST00000584182 89 ntBASIC3.07□□□□□ -1.92
LDB2O43679 AC073539.2-201ENST00000597113 165 ntBASIC3.07□□□□□ -1.92
LDB2O43679 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.07□□□□□ -1.92
LDB2O43679 AL133216.2-202ENST00000634512 349 ntBASIC3.07□□□□□ -1.92
LDB2O43679 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LDB2O43679 AC093010.3-201ENST00000570269 15214 ntBASIC3.07□□□□□ -1.92
LDB2O43679 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB2O43679 Y_RNA.33-201ENST00000362591 102 ntBASIC3.06□□□□□ -1.92
LDB2O43679 RNU6-254P-201ENST00000363377 107 ntBASIC3.06□□□□□ -1.92
LDB2O43679 Y_RNA.813-201ENST00000364639 102 ntBASIC3.06□□□□□ -1.92
LDB2O43679 RNU6-395P-201ENST00000365662 106 ntBASIC3.06□□□□□ -1.92
LDB2O43679 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LDB2O43679 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB2O43679 Y_RNA.480-201ENST00000384364 102 ntBASIC3.06□□□□□ -1.92
LDB2O43679 AC245054.2-201ENST00000415639 319 ntBASIC3.06□□□□□ -1.92
LDB2O43679 RPL23AP69-201ENST00000431134 458 ntBASIC3.06□□□□□ -1.92
LDB2O43679 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.06□□□□□ -1.92
LDB2O43679 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB2O43679 AP002884.2-201ENST00000471647 395 ntBASIC3.06□□□□□ -1.92
LDB2O43679 AC006445.1-201ENST00000491925 405 ntBASIC3.06□□□□□ -1.92
LDB2O43679 RPL30P5-201ENST00000494923 336 ntBASIC3.06□□□□□ -1.92
LDB2O43679 AC079140.5-201ENST00000507882 310 ntBASIC3.06□□□□□ -1.92
LDB2O43679 AC008716.1-201ENST00000511084 513 ntBASIC3.06□□□□□ -1.92
LDB2O43679 TBCAP3-201ENST00000512475 312 ntBASIC3.06□□□□□ -1.92
LDB2O43679 RNA5SP341-201ENST00000516261 117 ntBASIC3.06□□□□□ -1.92
LDB2O43679 RNU6-277P-201ENST00000516272 106 ntBASIC3.06□□□□□ -1.92
LDB2O43679 RNU6-1069P-201ENST00000516612 133 ntBASIC3.06□□□□□ -1.92
LDB2O43679 SCARNA13-201ENST00000516672 275 ntBASIC3.06□□□□□ -1.92
LDB2O43679 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB2O43679 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.06□□□□□ -1.92
LDB2O43679 AL121757.2-201ENST00000611223 313 ntBASIC3.06□□□□□ -1.92
LDB2O43679 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.06□□□□□ -1.92
LDB2O43679 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.06□□□□□ -1.92
LDB2O43679 SNORA50A-202ENST00000629536 136 ntBASIC3.06□□□□□ -1.92
LDB2O43679 MIR1302-1-201ENST00000637932 143 ntBASIC3.06□□□□□ -1.92
LDB2O43679 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.06□□□□□ -1.92
LDB2O43679 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB2O43679 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB2O43679 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LDB2O43679 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDB2O43679 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB2O43679 AC009487.2-201ENST00000420969 6821 ntBASIC3.05□□□□□ -1.92
LDB2O43679 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.05□□□□□ -1.92
LDB2O43679 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LDB2O43679 RNU6-1252P-201ENST00000363054 104 ntBASIC3.05□□□□□ -1.92
LDB2O43679 Y_RNA.212-201ENST00000364177 102 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms