Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 MIR147B-201ENST00000390185 80 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.3□□□□□ -1.88
NPHP1O15259 AC016831.2-201ENST00000417179 352 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.3□□□□□ -1.88
NPHP1O15259 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.3□□□□□ -1.88
NPHP1O15259 AL365338.1-201ENST00000422282 858 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 CALM2P2-201ENST00000428512 440 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 MICF-203ENST00000432679 129 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.3□□□□□ -1.88
NPHP1O15259 RPS15AP9-201ENST00000439856 381 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
NPHP1O15259 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.3□□□□□ -1.88
NPHP1O15259 Z83846.1-201ENST00000446798 265 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AL360271.2-201ENST00000447710 161 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AC132479.1-201ENST00000449160 144 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 NDUFB1P2-201ENST00000449477 176 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.3□□□□□ -1.88
NPHP1O15259 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AC104806.1-201ENST00000508720 308 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AC079140.3-201ENST00000511111 550 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 RNA5SP76-201ENST00000516277 87 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.3□□□□□ -1.88
NPHP1O15259 AL391840.1-201ENST00000571144 367 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 MIR3616-201ENST00000584070 92 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AL356280.1-201ENST00000603614 379 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AC087045.1-201ENST00000605856 382 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 RN7SKP299-201ENST00000606679 301 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.3□□□□□ -1.88
NPHP1O15259 AC090115.4-201ENST00000609970 188 ntBASIC3.3□□□□□ -1.88
NPHP1O15259 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NPHP1O15259 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 SNORD14B-201ENST00000364533 90 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 MIR504-201ENST00000385065 83 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.29□□□□□ -1.88
NPHP1O15259 BX682237.1-201ENST00000415016 335 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 CDK8P2-201ENST00000415020 547 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.29□□□□□ -1.88
NPHP1O15259 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.29□□□□□ -1.88
NPHP1O15259 MTCO2P11-201ENST00000431069 680 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AL627311.1-201ENST00000431514 115 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AC104058.1-201ENST00000448028 297 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.29□□□□□ -1.88
NPHP1O15259 AC090525.1-201ENST00000479116 478 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 SNORA31.18-201ENST00000517043 134 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.29□□□□□ -1.88
NPHP1O15259 OR5BN1P-201ENST00000532955 829 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AC092325.1-201ENST00000566449 554 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.29□□□□□ -1.88
NPHP1O15259 AC025678.1-201ENST00000567861 338 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 MIR4775-201ENST00000581168 75 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.29□□□□□ -1.88
NPHP1O15259 AL138889.2-201ENST00000603883 242 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 U6.42-201ENST00000618440 107 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AC010378.1-201ENST00000619270 362 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AC009161.2-201ENST00000624626 138 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.29□□□□□ -1.88
NPHP1O15259 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.29□□□□□ -1.88
NPHP1O15259 U6.114-201ENST00000636407 96 ntBASIC3.29□□□□□ -1.88
NPHP1O15259 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NPHP1O15259 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPHP1O15259 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.28□□□□□ -1.88
NPHP1O15259 MTND5P30-201ENST00000452896 1731 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPHP1O15259 SNORD114-30-201ENST00000364448 72 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 RNU1-109P-201ENST00000383960 147 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 RNU6-1179P-201ENST00000384667 107 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 MIR592-201ENST00000384959 97 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 CIR1P3-201ENST00000405137 479 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 SNORA3.2-201ENST00000408221 125 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.28□□□□□ -1.88
NPHP1O15259 OR6C66P-201ENST00000414917 930 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 RPLP0P7-201ENST00000416050 667 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPHP1O15259 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.28□□□□□ -1.88
NPHP1O15259 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.28□□□□□ -1.88
NPHP1O15259 AC022364.2-201ENST00000457963 554 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 RNU7-182P-201ENST00000459009 62 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 AP001324.2-201ENST00000461163 319 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.28□□□□□ -1.88
NPHP1O15259 AC008716.1-201ENST00000511084 513 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.28□□□□□ -1.88
NPHP1O15259 AP000787.2-201ENST00000604432 568 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 AC091834.1-201ENST00000614543 472 ntBASIC3.28□□□□□ -1.88
NPHP1O15259 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.28□□□□□ -1.88
NPHP1O15259 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.28□□□□□ -1.88
NPHP1O15259 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPHP1O15259 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPHP1O15259 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.28□□□□□ -1.88
NPHP1O15259 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NPHP1O15259 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NPHP1O15259 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
NPHP1O15259 ZNF658B-202ENST00000615961 3375 ntBASIC3.28□□□□□ -1.89
NPHP1O15259 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
NPHP1O15259 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.27□□□□□ -1.89
NPHP1O15259 AL109809.4-201ENST00000603520 2185 ntBASIC3.27□□□□□ -1.89
NPHP1O15259 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPHP1O15259 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPHP1O15259 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms