Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC090517.2-201ENST00000614966 680 ntBASIC2.77□□□□□ -1.97
TO15178 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.77□□□□□ -1.97
TO15178 AC007318.2-201ENST00000620999 243 ntBASIC2.77□□□□□ -1.97
TO15178 YWHAEP7-203ENST00000622054 312 ntBASIC2.77□□□□□ -1.97
TO15178 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
TO15178 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TO15178 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TO15178 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.76□□□□□ -1.97
TO15178 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.76□□□□□ -1.97
TO15178 ADAM3A-203ENST00000461344 2157 ntBASIC2.76□□□□□ -1.97
TO15178 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TO15178 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TO15178 SET-203ENST00000372688 801 ntTSL 2 BASIC2.76□□□□□ -1.97
TO15178 SNORA75B-201ENST00000384053 137 ntBASIC2.76□□□□□ -1.97
TO15178 Y_RNA.450-201ENST00000384198 113 ntBASIC2.76□□□□□ -1.97
TO15178 RNU6-434P-201ENST00000384376 107 ntBASIC2.76□□□□□ -1.97
TO15178 RNU6-1127P-201ENST00000384580 107 ntBASIC2.76□□□□□ -1.97
TO15178 Y_RNA.573-201ENST00000384763 105 ntBASIC2.76□□□□□ -1.97
TO15178 RNU6-648P-201ENST00000410190 107 ntBASIC2.76□□□□□ -1.97
TO15178 AC023141.4-201ENST00000412031 328 ntBASIC2.76□□□□□ -1.97
TO15178 MTCO1P20-201ENST00000425366 358 ntBASIC2.76□□□□□ -1.97
TO15178 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.76□□□□□ -1.97
TO15178 AL627311.1-201ENST00000431514 115 ntBASIC2.76□□□□□ -1.97
TO15178 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.76□□□□□ -1.97
TO15178 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.76□□□□□ -1.97
TO15178 AL671855.1-201ENST00000446875 1203 ntBASIC2.76□□□□□ -1.97
TO15178 HMGN2P10-201ENST00000448085 265 ntBASIC2.76□□□□□ -1.97
TO15178 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.76□□□□□ -1.97
TO15178 AL583843.1-201ENST00000456070 346 ntBASIC2.76□□□□□ -1.97
TO15178 RNU7-180P-201ENST00000459240 63 ntBASIC2.76□□□□□ -1.97
TO15178 RPL23AP11-201ENST00000475260 469 ntBASIC2.76□□□□□ -1.97
TO15178 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.76□□□□□ -1.97
TO15178 MRPS36P2-201ENST00000512569 299 ntBASIC2.76□□□□□ -1.97
TO15178 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.76□□□□□ -1.97
TO15178 MTND4P7-201ENST00000523876 130 ntBASIC2.76□□□□□ -1.97
TO15178 COX6CP5-201ENST00000527162 228 ntBASIC2.76□□□□□ -1.97
TO15178 AC107016.2-201ENST00000547968 190 ntBASIC2.76□□□□□ -1.97
TO15178 AC021739.1-201ENST00000559631 174 ntBASIC2.76□□□□□ -1.97
TO15178 CYCSP39-201ENST00000565821 309 ntBASIC2.76□□□□□ -1.97
TO15178 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.76□□□□□ -1.97
TO15178 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.76□□□□□ -1.97
TO15178 OR1M4P-201ENST00000589199 287 ntBASIC2.76□□□□□ -1.97
TO15178 AL451007.1-201ENST00000595491 289 ntBASIC2.76□□□□□ -1.97
TO15178 AP003465.2-201ENST00000602571 373 ntBASIC2.76□□□□□ -1.97
TO15178 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TO15178 AL359198.2-201ENST00000611836 194 ntBASIC2.76□□□□□ -1.97
TO15178 AC010338.1-201ENST00000621823 717 ntBASIC2.76□□□□□ -1.97
TO15178 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.76□□□□□ -1.97
TO15178 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.76□□□□□ -1.97
TO15178 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TO15178 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TO15178 AC096644.4-201ENST00000563417 2912 ntBASIC2.75□□□□□ -1.97
TO15178 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TO15178 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
TO15178 SNORD70.1-201ENST00000391007 85 ntBASIC2.75□□□□□ -1.97
TO15178 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TO15178 MIR548F1-201ENST00000408667 84 ntBASIC2.75□□□□□ -1.97
TO15178 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.75□□□□□ -1.97
TO15178 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.75□□□□□ -1.97
TO15178 AL353621.1-201ENST00000418219 243 ntBASIC2.75□□□□□ -1.97
TO15178 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.75□□□□□ -1.97
TO15178 AL669831.1-202ENST00000428504 417 ntBASIC2.75□□□□□ -1.97
TO15178 GTF2IP20-201ENST00000431663 360 ntBASIC2.75□□□□□ -1.97
TO15178 UBE2V1P8-201ENST00000437166 265 ntBASIC2.75□□□□□ -1.97
TO15178 GTF2IP13-201ENST00000438487 386 ntBASIC2.75□□□□□ -1.97
TO15178 WASF1P1-201ENST00000447560 1131 ntBASIC2.75□□□□□ -1.97
TO15178 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.75□□□□□ -1.97
TO15178 S100A11P2-201ENST00000467589 312 ntBASIC2.75□□□□□ -1.97
TO15178 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.75□□□□□ -1.97
TO15178 RN7SL633P-201ENST00000488974 297 ntBASIC2.75□□□□□ -1.97
TO15178 MTAPP1-201ENST00000489154 819 ntBASIC2.75□□□□□ -1.97
TO15178 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.75□□□□□ -1.97
TO15178 MTCO3P9-201ENST00000506989 781 ntBASIC2.75□□□□□ -1.97
TO15178 AC113155.1-201ENST00000511141 769 ntBASIC2.75□□□□□ -1.97
TO15178 AC074344.1-201ENST00000512823 224 ntBASIC2.75□□□□□ -1.97
TO15178 RNA5SP341-201ENST00000516261 117 ntBASIC2.75□□□□□ -1.97
TO15178 SNORD60.2-201ENST00000516883 86 ntBASIC2.75□□□□□ -1.97
TO15178 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.75□□□□□ -1.97
TO15178 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.75□□□□□ -1.97
TO15178 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.75□□□□□ -1.97
TO15178 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.75□□□□□ -1.97
TO15178 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.75□□□□□ -1.97
TO15178 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.75□□□□□ -1.97
TO15178 AC234778.2-201ENST00000566241 354 ntBASIC2.75□□□□□ -1.97
TO15178 MIR3941-201ENST00000582572 103 ntBASIC2.75□□□□□ -1.97
TO15178 NRBF2P5-201ENST00000603087 788 ntBASIC2.75□□□□□ -1.97
TO15178 AC012119.1-201ENST00000603184 222 ntBASIC2.75□□□□□ -1.97
TO15178 AC092794.1-201ENST00000612734 582 ntBASIC2.75□□□□□ -1.97
TO15178 AC107871.2-201ENST00000612894 502 ntBASIC2.75□□□□□ -1.97
TO15178 U6atac.1-201ENST00000616025 117 ntBASIC2.75□□□□□ -1.97
TO15178 uc_338.34-201ENST00000617467 174 ntBASIC2.75□□□□□ -1.97
TO15178 FER-210ENST00000628534 558 ntTSL 5 BASIC2.75□□□□□ -1.97
TO15178 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.75□□□□□ -1.97
TO15178 AC000403.1-201ENST00000613696 3585 ntBASIC2.75□□□□□ -1.97
TO15178 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TO15178 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
TO15178 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TO15178 MTND4P5-201ENST00000435821 1374 ntBASIC2.74□□□□□ -1.97
TO15178 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TO15178 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms