Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SNORA40C-201ENST00000391285 128 ntBASIC1.92□□□□□ -2.1
CDC7O00311 RNU6-1025P-201ENST00000410629 104 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AC098592.1-201ENST00000419352 333 ntBASIC1.92□□□□□ -2.1
CDC7O00311 RPS15AP12-201ENST00000419498 388 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AL591704.1-201ENST00000432574 275 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.92□□□□□ -2.1
CDC7O00311 AL078601.1-201ENST00000444542 271 ntBASIC1.92□□□□□ -2.1
CDC7O00311 RPL7P12-201ENST00000446719 750 ntBASIC1.92□□□□□ -2.1
CDC7O00311 BTF3P15-201ENST00000455606 336 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AL441985.1-201ENST00000457727 251 ntBASIC1.92□□□□□ -2.1
CDC7O00311 RPL21P99-201ENST00000480369 423 ntBASIC1.92□□□□□ -2.1
CDC7O00311 RPL22P13-201ENST00000493291 347 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AC109927.2-201ENST00000506416 303 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.92□□□□□ -2.1
CDC7O00311 RNU7-193P-201ENST00000516723 65 ntBASIC1.92□□□□□ -2.1
CDC7O00311 HSPE1P18-201ENST00000517602 280 ntBASIC1.92□□□□□ -2.1
CDC7O00311 MTND4LP18-201ENST00000526864 291 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AL157871.3-201ENST00000557231 293 ntBASIC1.92□□□□□ -2.1
CDC7O00311 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
CDC7O00311 LINC00933-203ENST00000559812 219 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AC012213.3-201ENST00000577199 777 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CDC7O00311 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.92□□□□□ -2.1
CDC7O00311 AC110994.2-201ENST00000635481 492 ntBASIC1.92□□□□□ -2.1
CDC7O00311 AC007671.2-201ENST00000637344 619 ntBASIC1.92□□□□□ -2.1
CDC7O00311 TEX21P-201ENST00000447107 1476 ntBASIC1.92□□□□□ -2.1
CDC7O00311 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CDC7O00311 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.91□□□□□ -2.1
CDC7O00311 AL445523.1-201ENST00000451184 1362 ntBASIC1.91□□□□□ -2.1
CDC7O00311 SNORD114-1-201ENST00000362705 72 ntBASIC1.91□□□□□ -2.1
CDC7O00311 RNU6-482P-201ENST00000391068 107 ntBASIC1.91□□□□□ -2.1
CDC7O00311 RNU2-20P-201ENST00000410425 191 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AC097463.2-201ENST00000421074 142 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AC013410.2-201ENST00000422627 201 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.91□□□□□ -2.1
CDC7O00311 HMGB1P18-201ENST00000438801 619 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AC124916.1-201ENST00000444020 547 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.91□□□□□ -2.1
CDC7O00311 Z73417.1-201ENST00000447373 778 ntBASIC1.91□□□□□ -2.1
CDC7O00311 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.91□□□□□ -2.1
CDC7O00311 PSPHP1-201ENST00000450062 261 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.91□□□□□ -2.1
CDC7O00311 MTND1P12-201ENST00000455231 147 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.91□□□□□ -2.1
CDC7O00311 SNORD11.1-201ENST00000459482 85 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AC018437.1-201ENST00000492214 406 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.91□□□□□ -2.1
CDC7O00311 MTND4P2-201ENST00000507767 1203 ntBASIC1.91□□□□□ -2.1
CDC7O00311 MRPS36P3-201ENST00000519284 130 ntBASIC1.91□□□□□ -2.1
CDC7O00311 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.91□□□□□ -2.1
CDC7O00311 AC008749.1-201ENST00000597650 306 ntBASIC1.91□□□□□ -2.1
CDC7O00311 MIR15A-201ENST00000607334 83 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AC027449.1-201ENST00000608890 407 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AL355816.2-201ENST00000610049 647 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AC104010.1-201ENST00000616889 150 ntBASIC1.91□□□□□ -2.1
CDC7O00311 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.91□□□□□ -2.1
CDC7O00311 AC138627.2-201ENST00000624202 601 ntBASIC1.91□□□□□ -2.1
CDC7O00311 AC241585.2-209ENST00000638217 143 ntBASIC1.91□□□□□ -2.1
CDC7O00311 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDC7O00311 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
CDC7O00311 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CDC7O00311 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.9□□□□□ -2.11
CDC7O00311 RNU5F-6P-201ENST00000362979 116 ntBASIC1.9□□□□□ -2.11
CDC7O00311 SNORA75B-201ENST00000384053 137 ntBASIC1.9□□□□□ -2.11
CDC7O00311 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
CDC7O00311 RPS24P7-201ENST00000416921 246 ntBASIC1.9□□□□□ -2.11
CDC7O00311 RPL22P18-201ENST00000417197 377 ntBASIC1.9□□□□□ -2.11
CDC7O00311 AC006366.1-201ENST00000422002 759 ntBASIC1.9□□□□□ -2.11
CDC7O00311 AL008629.1-201ENST00000438615 184 ntBASIC1.9□□□□□ -2.11
CDC7O00311 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.9□□□□□ -2.11
CDC7O00311 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.9□□□□□ -2.11
CDC7O00311 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.9□□□□□ -2.11
CDC7O00311 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.9□□□□□ -2.11
CDC7O00311 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.9□□□□□ -2.11
CDC7O00311 RNU2-10P-201ENST00000516375 211 ntBASIC1.9□□□□□ -2.11
CDC7O00311 RNU6-678P-201ENST00000516832 109 ntBASIC1.9□□□□□ -2.11
CDC7O00311 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.9□□□□□ -2.11
CDC7O00311 FAM92A1P1-201ENST00000528023 890 ntBASIC1.9□□□□□ -2.11
CDC7O00311 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.9□□□□□ -2.11
CDC7O00311 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.9□□□□□ -2.11
CDC7O00311 AC091489.2-201ENST00000566263 604 ntBASIC1.9□□□□□ -2.11
CDC7O00311 AC092953.2-201ENST00000608000 699 ntBASIC1.9□□□□□ -2.11
CDC7O00311 AC024933.1-201ENST00000608472 348 ntBASIC1.9□□□□□ -2.11
CDC7O00311 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.9□□□□□ -2.11
CDC7O00311 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDC7O00311 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDC7O00311 SNORA16B-201ENST00000364674 135 ntBASIC1.89□□□□□ -2.11
CDC7O00311 RNU6-533P-201ENST00000384144 107 ntBASIC1.89□□□□□ -2.11
CDC7O00311 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CDC7O00311 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CDC7O00311 CIR1P3-201ENST00000405137 479 ntBASIC1.89□□□□□ -2.11
CDC7O00311 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
CDC7O00311 RN7SKP158-201ENST00000410453 326 ntBASIC1.89□□□□□ -2.11
CDC7O00311 AL030996.1-201ENST00000411430 235 ntBASIC1.89□□□□□ -2.11
CDC7O00311 AL353621.1-201ENST00000418219 243 ntBASIC1.89□□□□□ -2.11
CDC7O00311 EIF1AXP1-201ENST00000419267 435 ntBASIC1.89□□□□□ -2.11
CDC7O00311 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.89□□□□□ -2.11
CDC7O00311 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.89□□□□□ -2.11
CDC7O00311 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.89□□□□□ -2.11
CDC7O00311 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms