Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.91□□□□□ -1.62
USP17L11C9JVI0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
USP17L11C9JVI0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP17L11C9JVI0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP17L11C9JVI0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
USP17L11C9JVI0 AC139713.2-215ENST00000641428 5037 ntBASIC4.9□□□□□ -1.62
USP17L11C9JVI0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.9□□□□□ -1.62
USP17L11C9JVI0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
USP17L11C9JVI0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.9□□□□□ -1.62
USP17L11C9JVI0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
USP17L11C9JVI0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
USP17L11C9JVI0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.9□□□□□ -1.62
USP17L11C9JVI0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
USP17L11C9JVI0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.9□□□□□ -1.62
USP17L11C9JVI0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 snoU2_19.2-201ENST00000363024 80 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 RNU6-17P-201ENST00000384245 107 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 RNU6-18P-201ENST00000384527 107 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 MIR554-201ENST00000384874 96 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 CYCSP32-201ENST00000440548 321 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 HMGB3P8-201ENST00000449709 577 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 RNA5SP246-201ENST00000458909 119 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 RPL21P104-201ENST00000464143 478 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 RN7SL542P-201ENST00000467147 294 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 RPL23AP75-201ENST00000491601 451 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 RNU6-1012P-201ENST00000516606 109 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 SNORA67.7-201ENST00000516664 135 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 AC022868.1-201ENST00000517767 391 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 DEFB108E-201ENST00000524692 240 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 MRPS36P4-201ENST00000534436 298 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 MIR3158-1-201ENST00000583596 81 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 AC010928.2-201ENST00000588017 287 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 AC009779.6-201ENST00000603972 165 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 RPL23AP88-201ENST00000605759 454 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 AC006133.1-201ENST00000617106 264 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 AC024581.2-201ENST00000619986 252 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
USP17L11C9JVI0 AP001642.1-201ENST00000624727 2117 ntBASIC4.9□□□□□ -1.63
USP17L11C9JVI0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RNU6-1301P-201ENST00000362724 104 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 Y_RNA.143-201ENST00000363520 106 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 MIR888-201ENST00000401186 77 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RNA5SP129-201ENST00000410276 118 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RPL23AP46-201ENST00000438548 490 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 AC098831.1-201ENST00000440661 216 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RPL23AP14-201ENST00000468281 468 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RPS26P21-201ENST00000475397 348 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RPL23AP65-201ENST00000475608 468 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RN7SL817P-201ENST00000480777 288 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RN7SL604P-201ENST00000492589 296 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RNU6-1338P-201ENST00000516328 91 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 RNU6-182P-201ENST00000516970 105 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 AP004242.1-201ENST00000533701 349 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 AC006064.5-201ENST00000541782 248 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 AL365434.2-201ENST00000607979 234 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 AC240442.1-201ENST00000616055 283 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 AL353743.1-202ENST00000431724 1695 ntBASIC4.89□□□□□ -1.63
USP17L11C9JVI0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.89□□□□□ -1.63
USP17L11C9JVI0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.88□□□□□ -1.63
USP17L11C9JVI0 RNU6-222P-201ENST00000362438 107 ntBASIC4.88□□□□□ -1.63
USP17L11C9JVI0 RNU6-942P-201ENST00000363002 107 ntBASIC4.88□□□□□ -1.63
USP17L11C9JVI0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
USP17L11C9JVI0 Y_RNA.785-201ENST00000384290 109 ntBASIC4.88□□□□□ -1.63
USP17L11C9JVI0 Y_RNA.581-201ENST00000391017 97 ntBASIC4.88□□□□□ -1.63
USP17L11C9JVI0 AL079342.1-201ENST00000401460 267 ntBASIC4.88□□□□□ -1.63
USP17L11C9JVI0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.88□□□□□ -1.63
USP17L11C9JVI0 AC243964.1-201ENST00000441814 261 ntBASIC4.88□□□□□ -1.63
USP17L11C9JVI0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.88□□□□□ -1.63
USP17L11C9JVI0 AL139109.1-201ENST00000455491 297 ntBASIC4.88□□□□□ -1.63
USP17L11C9JVI0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.88□□□□□ -1.63
USP17L11C9JVI0 RNU5B-3P-201ENST00000516601 115 ntBASIC4.88□□□□□ -1.63
USP17L11C9JVI0 RNU1-45P-201ENST00000517191 141 ntBASIC4.88□□□□□ -1.63
USP17L11C9JVI0 IFITM8P-201ENST00000522529 394 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms