Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RNU6-575P-201ENST00000411326 105 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.21□□□□□ -2.38
COL6A5A8TX70 RPS15AP27-201ENST00000449183 343 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 AC015908.1-201ENST00000478739 476 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 AC138853.1-201ENST00000503549 823 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.21□□□□□ -2.38
COL6A5A8TX70 RNA5SP404-201ENST00000517118 132 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 AC011260.1-201ENST00000578420 472 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 AL355472.4-201ENST00000610233 626 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
COL6A5A8TX70 RNA5SP125-201ENST00000364843 120 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 NDUFB4P7-201ENST00000423198 363 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 Z82190.1-201ENST00000454534 490 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
COL6A5A8TX70 PSMC1P5-201ENST00000512850 177 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.21□□□□□ -2.38
COL6A5A8TX70 HSPE1P7-201ENST00000604681 321 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 AC018755.4-201ENST00000619715 454 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 AC116563.2-201ENST00000624751 535 ntBASIC0.21□□□□□ -2.38
COL6A5A8TX70 RNY4P28-201ENST00000365281 93 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 HSPE1P9-201ENST00000440046 311 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 U8.21-201ENST00000459536 136 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 AC021146.9-201ENST00000512503 156 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 SCARNA16.2-201ENST00000516520 172 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 HMGB1P14-201ENST00000557424 591 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 AC011155.2-201ENST00000623202 216 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 AL512506.2-201ENST00000624472 458 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.2□□□□□ -2.38
COL6A5A8TX70 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.2□□□□□ -2.38
COL6A5A8TX70 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.2□□□□□ -2.38
COL6A5A8TX70 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.2□□□□□ -2.38
COL6A5A8TX70 RAC1P9-201ENST00000604990 392 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 AC100812.1-201ENST00000607622 580 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 AC091304.9-201ENST00000612091 226 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 PART1_2.1-201ENST00000612397 250 ntBASIC0.2□□□□□ -2.38
COL6A5A8TX70 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.2□□□□□ -2.38
COL6A5A8TX70 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.2□□□□□ -2.38
COL6A5A8TX70 RNU1-119P-201ENST00000391122 165 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
COL6A5A8TX70 PTGES3P4-201ENST00000426243 356 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 BTF3P11-201ENST00000426582 477 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.19□□□□□ -2.38
COL6A5A8TX70 SNRPGP6-201ENST00000451124 220 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 AC107626.1-201ENST00000471084 183 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 RPL26P26-201ENST00000480251 434 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.19□□□□□ -2.38
COL6A5A8TX70 AC019288.1-201ENST00000557918 224 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.19□□□□□ -2.38
COL6A5A8TX70 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 AL365204.3-201ENST00000612448 685 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 AC073349.3-201ENST00000617616 186 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 AP003400.5-201ENST00000624827 617 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 AC110792.3-201ENST00000595906 1614 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 U3.8-201ENST00000363675 217 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 Y_RNA.498-201ENST00000384460 102 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 RNU6-1197P-201ENST00000391183 107 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.19□□□□□ -2.38
COL6A5A8TX70 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.19□□□□□ -2.38
COL6A5A8TX70 RNU7-40P-201ENST00000516397 64 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 MIR4422-201ENST00000581938 83 ntBASIC0.19□□□□□ -2.38
COL6A5A8TX70 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.19□□□□□ -2.38
COL6A5A8TX70 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
COL6A5A8TX70 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
COL6A5A8TX70 RNU1-124P-201ENST00000363861 145 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
COL6A5A8TX70 RPL21P111-201ENST00000418453 477 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 MTCO3P45-201ENST00000443036 613 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 AL157398.1-201ENST00000452981 186 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.18□□□□□ -2.38
COL6A5A8TX70 MIR4764-201ENST00000580680 88 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.18□□□□□ -2.38
COL6A5A8TX70 AL590410.1-201ENST00000617925 333 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
COL6A5A8TX70 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
COL6A5A8TX70 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
COL6A5A8TX70 RNU6-40P-201ENST00000384254 107 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 MIR608-201ENST00000384820 100 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 MTND5P8-201ENST00000449817 1083 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 AL096803.2-201ENST00000450032 677 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.18□□□□□ -2.38
COL6A5A8TX70 SCARNA8-201ENST00000515924 131 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 AL078604.3-201ENST00000615580 211 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 AC123767.1-202ENST00000620407 817 ntBASIC0.18□□□□□ -2.38
COL6A5A8TX70 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
COL6A5A8TX70 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
COL6A5A8TX70 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
COL6A5A8TX70 RNU6-1216P-201ENST00000362590 107 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 AC092634.6-201ENST00000418558 192 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 AL589880.1-201ENST00000448271 287 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.17□□□□□ -2.38
COL6A5A8TX70 SYPL1P1-201ENST00000473622 768 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 SCARNA21.1-201ENST00000515996 128 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 MIR4667-201ENST00000578933 66 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 AC021171.1-201ENST00000603137 706 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 MIR371B-201ENST00000638082 66 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 AC010615.1-201ENST00000594254 1764 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 MTND4P14-201ENST00000435799 1354 ntBASIC0.17□□□□□ -2.38
COL6A5A8TX70 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
COL6A5A8TX70 RNU6-1222P-201ENST00000384615 107 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms