Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 RNA5SP121-201ENST00000516537 101 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 ERHP1-201ENST00000523006 310 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC007151.1-201ENST00000572774 483 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 FAM60BP-201ENST00000578364 658 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC090897.2-201ENST00000581715 130 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC060771.1-201ENST00000582031 164 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC018714.1-201ENST00000605028 208 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC073968.1-201ENST00000618594 637 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AC022306.3-201ENST00000619930 550 ntBASIC1.05□□□□□ -2.24
COL6A6A6NMZ7 AP000648.3-201ENST00000623539 4507 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC005832.2-201ENST00000538921 1430 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 RNU6-217P-201ENST00000384164 104 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 RNU11-5P-201ENST00000391216 129 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 RNU4-22P-201ENST00000411058 166 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 NEFMP1-201ENST00000443423 1006 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 EEF1E1P1-201ENST00000446998 430 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC138853.1-201ENST00000503549 823 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 RPF2P2-201ENST00000504693 896 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC036111.3-201ENST00000526389 112 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AP004247.1-201ENST00000531556 1289 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 CYCSP2-201ENST00000558168 301 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC022022.2-201ENST00000602989 360 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AL157392.4-201ENST00000609756 345 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 U2.21-201ENST00000637295 81 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 SNORD116.1-201ENST00000365628 92 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 MIR620-201ENST00000385232 95 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 RNA5SP354-201ENST00000391247 136 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 CBX3P6-201ENST00000430257 527 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 GPM6BP2-201ENST00000432046 144 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 GPM6BP3-201ENST00000442797 145 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 MTCO3P45-201ENST00000443036 613 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 GPM6BP1-201ENST00000446387 144 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 MTND1P9-201ENST00000453775 944 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC022493.1-201ENST00000492984 337 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC093852.1-201ENST00000503587 266 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 SCARNA15.2-201ENST00000516409 127 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC107934.1-201ENST00000522215 217 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 OR4R1P-201ENST00000529879 463 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC022878.1-201ENST00000530684 149 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 DUXAP1-201ENST00000556632 463 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 MIR3609-201ENST00000582661 80 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 VN1R107P-201ENST00000601784 209 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 U73023.1-201ENST00000603134 700 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 7SK.7-201ENST00000603504 247 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 HSPE1P7-201ENST00000604681 321 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 AC103710.4-201ENST00000609301 899 ntBASIC1.04□□□□□ -2.24
COL6A6A6NMZ7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 RNU5E-8P-201ENST00000363502 116 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 RNU4-92P-201ENST00000363783 136 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 RNU6-343P-201ENST00000364709 104 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 SNORA67.1-201ENST00000364749 141 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 RNU6-224P-201ENST00000384055 107 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 RNU1-148P-201ENST00000384472 162 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 RNU6-83P-201ENST00000384568 112 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 DHFRP6-201ENST00000401776 268 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 RNU2-39P-201ENST00000410604 198 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 CYCSP48-201ENST00000417124 323 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 RPL22P18-201ENST00000417197 377 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 AL358176.2-201ENST00000425769 204 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 EXOSC3P1-201ENST00000448649 500 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 CBX3P3-201ENST00000508108 532 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 SUB1P1-201ENST00000524415 382 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 AC011260.1-201ENST00000578420 472 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 AC106052.1-201ENST00000608029 497 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 FTX_3.1-201ENST00000610451 147 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 AC068880.5-201ENST00000624331 290 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 AC091965.5-201ENST00000624785 342 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 AC019226.1-201ENST00000625666 515 ntBASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
COL6A6A6NMZ7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
COL6A6A6NMZ7 RNU6-1214P-201ENST00000363650 109 ntBASIC1.03□□□□□ -2.25
COL6A6A6NMZ7 RNU6-203P-201ENST00000384038 104 ntBASIC1.03□□□□□ -2.25
COL6A6A6NMZ7 MIR135A2-201ENST00000384854 100 ntBASIC1.03□□□□□ -2.25
COL6A6A6NMZ7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms