Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MTCO3P5-201ENST00000433620 714 ntBASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 AC024082.2-201ENST00000434771 238 ntBASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 AC092757.1-201ENST00000467293 467 ntBASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 AC074344.1-201ENST00000512823 224 ntBASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 MIR151B-201ENST00000584249 96 ntBASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 AC007490.1-201ENST00000624321 703 ntBASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 MTCO1P23-201ENST00000415223 1526 ntBASIC-0.09□□□□□ -2.42
LINC01549A6NIU2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 MIR936-201ENST00000401264 98 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 RN7SKP284-201ENST00000411002 343 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AC078974.1-201ENST00000411597 223 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 FO393414.1-201ENST00000428697 1184 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 RAC1P7-201ENST00000445367 377 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AC233982.1-201ENST00000451247 436 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 HMGN1P13-201ENST00000505795 138 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 SNORA70.22-201ENST00000517160 124 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AC067904.2-201ENST00000517322 1283 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AC025423.5-201ENST00000550230 219 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 EEF1B2P4-201ENST00000551398 348 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 POLR2KP1-201ENST00000553226 168 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AC022387.2-201ENST00000604050 448 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 LARP7P1-201ENST00000605576 316 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 Z82243.1-201ENST00000609432 473 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AP005229.2-201ENST00000609980 697 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 AC006213.4-201ENST00000616184 634 ntBASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.1□□□□□ -2.43
LINC01549A6NIU2 MIRLET7D-201ENST00000362263 87 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 RNU6-1164P-201ENST00000364428 107 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 SNORD14D-201ENST00000384390 87 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 RNU6-452P-201ENST00000384406 107 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 RNU6-45P-201ENST00000384471 107 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 MIR216A-201ENST00000385063 110 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 MIR1262-201ENST00000408276 93 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 MIR548J-201ENST00000408833 112 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 RPL22P13-201ENST00000493291 347 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 RNU6-667P-201ENST00000517186 102 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 MIR4768-201ENST00000585270 74 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 AP000654.2-201ENST00000605633 586 ntBASIC-0.11□□□□□ -2.43
LINC01549A6NIU2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 RNU1-133P-201ENST00000364867 167 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 MIR888-201ENST00000401186 77 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 AL139098.1-201ENST00000407291 389 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 BPY2DP-201ENST00000422208 265 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 RPEP5-201ENST00000441137 268 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 snoU109.4-201ENST00000458953 143 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 MEMO1P3-201ENST00000459811 302 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 RPS29P1-201ENST00000465274 159 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 LARP1BP2-201ENST00000486594 519 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 AC022493.2-201ENST00000506122 481 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 ATP5EP1-201ENST00000510257 156 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 SNORA68.3-201ENST00000515906 83 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 IGJP1-201ENST00000522682 475 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 HSPA8P13-201ENST00000523715 472 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 AP003392.2-201ENST00000527269 208 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 AP003327.1-201ENST00000529684 127 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 AC009268.1-201ENST00000561352 1203 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 AC015688.6-201ENST00000577737 104 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 HMGN1P30-201ENST00000589286 268 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 AP003465.2-201ENST00000602571 373 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 AC090578.1-201ENST00000604955 591 ntBASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
LINC01549A6NIU2 AL355615.1-201ENST00000406187 641 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 AL161935.2-201ENST00000414627 60 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 Z82210.1-201ENST00000440037 231 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 AC098831.1-201ENST00000440661 216 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 RPS20P24-201ENST00000457473 361 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 AL049874.1-201ENST00000489560 388 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 RNA5SP255-201ENST00000516370 107 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-0.13□□□□□ -2.43
LINC01549A6NIU2 AP003355.1-201ENST00000518956 587 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms