Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC092192.1-201ENST00000633154 1018 ntBASIC0.41□□□□□ -2.34
CNOT1A5YKK6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
CNOT1A5YKK6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.4□□□□□ -2.34
CNOT1A5YKK6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.4□□□□□ -2.34
CNOT1A5YKK6 AC134050.1-201ENST00000495088 933 ntBASIC0.4□□□□□ -2.34
CNOT1A5YKK6 AC008494.2-201ENST00000514544 370 ntBASIC0.4□□□□□ -2.34
CNOT1A5YKK6 AC019288.1-201ENST00000557918 224 ntBASIC0.4□□□□□ -2.34
CNOT1A5YKK6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.4□□□□□ -2.34
CNOT1A5YKK6 AC005832.2-201ENST00000538921 1430 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 RNA5SP56-201ENST00000410277 118 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 AC096649.2-201ENST00000416186 393 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 AC092047.1-201ENST00000424997 240 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 AC092573.2-201ENST00000434546 243 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 CYP2C59P-201ENST00000457790 269 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.4□□□□□ -2.35
CNOT1A5YKK6 AC011406.1-201ENST00000512440 370 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CNOT1A5YKK6 SNORA4.4-201ENST00000515921 135 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 AC004812.1-201ENST00000540773 146 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 AC073308.1-201ENST00000623696 305 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 AL512506.2-201ENST00000624472 458 ntBASIC0.4□□□□□ -2.35
CNOT1A5YKK6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
CNOT1A5YKK6 RNU1-124P-201ENST00000363861 145 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 MIR32-201ENST00000384965 70 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 MT-TC-201ENST00000387405 66 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 MRPL35P1-201ENST00000404272 572 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.39□□□□□ -2.35
CNOT1A5YKK6 RPL36P19-201ENST00000430744 301 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC114982.1-201ENST00000469402 321 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC104057.1-201ENST00000515547 497 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC090115.3-201ENST00000553218 849 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC008945.2-201ENST00000606056 604 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC013470.4-201ENST00000619978 986 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 RNU1-96P-201ENST00000364163 162 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 RNU4-67P-201ENST00000364569 141 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 RPS27P16-201ENST00000425758 201 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 ZNF863P-201ENST00000426746 417 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 TAAR7P-201ENST00000436141 242 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC008562.1-201ENST00000521763 330 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.39□□□□□ -2.35
CNOT1A5YKK6 MIR4504-201ENST00000577413 92 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 MIR4493-201ENST00000584016 73 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.39□□□□□ -2.35
CNOT1A5YKK6 MTCO2P22-201ENST00000603246 681 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 U4atac.1-201ENST00000618345 95 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AL391597.1-201ENST00000618707 694 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 AC008443.7-201ENST00000622195 246 ntBASIC0.39□□□□□ -2.35
CNOT1A5YKK6 HMGN2P39-201ENST00000398005 273 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 RNU6-272P-201ENST00000411028 104 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.38□□□□□ -2.35
CNOT1A5YKK6 POLR2KP1-201ENST00000553226 168 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 AC084824.5-201ENST00000612009 413 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CNOT1A5YKK6 Y_RNA.18-201ENST00000362461 102 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 MIR1207-201ENST00000408249 87 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.38□□□□□ -2.35
CNOT1A5YKK6 AL358794.1-201ENST00000445689 381 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.38□□□□□ -2.35
CNOT1A5YKK6 AC112206.3-201ENST00000514578 389 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.38□□□□□ -2.35
CNOT1A5YKK6 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.38□□□□□ -2.35
CNOT1A5YKK6 AC022202.1-201ENST00000613515 211 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 uc_338.17-201ENST00000619633 179 ntBASIC0.38□□□□□ -2.35
CNOT1A5YKK6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.38□□□□□ -2.35
CNOT1A5YKK6 AC008163.1-202ENST00000636004 2889 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 RNU1-58P-201ENST00000362413 163 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 MIR100-201ENST00000385259 80 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CNOT1A5YKK6 PRRC2CP1-201ENST00000404428 159 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AL117342.1-201ENST00000404861 406 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AC010099.3-201ENST00000423896 409 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.37□□□□□ -2.35
CNOT1A5YKK6 RPS25P9-201ENST00000435591 252 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AC104689.1-201ENST00000473356 768 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AC073544.2-201ENST00000601155 540 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AL359854.1-201ENST00000614203 1594 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 SNORA4.1-201ENST00000364263 144 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 MIR29C-201ENST00000385231 88 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AC245102.2-201ENST00000448956 180 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AL049714.1-201ENST00000466686 347 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 AC138853.1-201ENST00000503549 823 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.37□□□□□ -2.35
CNOT1A5YKK6 Z99571.1-201ENST00000636677 394 ntBASIC0.37□□□□□ -2.35
CNOT1A5YKK6 RNU6-98P-201ENST00000384173 107 ntBASIC0.36□□□□□ -2.35
CNOT1A5YKK6 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
CNOT1A5YKK6 MIR325-201ENST00000385260 98 ntBASIC0.36□□□□□ -2.35
CNOT1A5YKK6 RSL24D1P8-201ENST00000434442 492 ntBASIC0.36□□□□□ -2.35
CNOT1A5YKK6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.36□□□□□ -2.35
CNOT1A5YKK6 HSPE1P13-201ENST00000451143 297 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms