Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL442663.2-201ENST00000554385 511 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC005476.1-201ENST00000554427 397 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC021739.1-201ENST00000559631 174 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 CPDP1-201ENST00000579660 283 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 SRGNP1-201ENST00000603392 451 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL138880.2-201ENST00000616214 239 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC006133.1-201ENST00000617106 264 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC097372.5-201ENST00000623665 376 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC110491.1-201ENST00000562191 2010 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 MTND4P27-201ENST00000450813 1354 ntBASIC2.74□□□□□ -1.97
IGHV4-28A0A0C4DH34 UBE3AP2-201ENST00000429033 2259 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNA5SP124-201ENST00000362739 110 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU6-527P-201ENST00000363425 104 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNA5SP322-201ENST00000363617 119 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 Y_RNA.216-201ENST00000364205 93 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 Y_RNA.326-201ENST00000365176 113 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU6-1280P-201ENST00000365211 107 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU6-1040P-201ENST00000383974 107 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU1-89P-201ENST00000384592 164 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 MIR23B-201ENST00000384832 97 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 MIR200C-201ENST00000384980 68 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU6-308P-201ENST00000390957 107 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 SNORA75.6-201ENST00000391318 127 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 RAC1P3-201ENST00000416129 580 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 MTND3P9-201ENST00000429526 346 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL714022.1-201ENST00000439897 151 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 U8.21-201ENST00000459536 136 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL133162.1-201ENST00000463228 453 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 ACA59.1-201ENST00000515966 143 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU6-120P-201ENST00000516077 103 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 SNORA67.7-201ENST00000516664 135 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 MIR3158-1-201ENST00000583596 81 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 MIR3171-201ENST00000584270 74 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC020914.4-201ENST00000597690 277 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC024153.1-201ENST00000603103 365 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 SNRPGP17-201ENST00000603780 214 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 CYP2C61P-201ENST00000604072 290 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 MIR486-1-201ENST00000612171 68 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL121772.2-201ENST00000614331 297 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC039056.2-201ENST00000622261 511 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL732372.2-225ENST00000642124 456 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 CDC27P3-201ENST00000635418 1910 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AP001148.1-201ENST00000624124 2359 ntBASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL136164.4-201ENST00000625013 2135 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC018529.3-201ENST00000624212 2254 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU6-858P-201ENST00000362436 107 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU6-105P-201ENST00000363909 104 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 SNORD116-20-201ENST00000384529 92 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 U8.11-201ENST00000384699 133 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 U8.12-201ENST00000384701 133 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 MIR559-201ENST00000385188 96 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL590004.1-201ENST00000405321 300 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 FTH1P15-201ENST00000406984 280 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 RNU6-1077P-201ENST00000410506 102 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 RPL23AP50-201ENST00000434149 455 ntBASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.72□□□□□ -1.97
IGHV4-28A0A0C4DH34 AC006026.2-201ENST00000457376 180 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms