Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC022387.2-201ENST00000604050 448 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC211469.2-201ENST00000605461 205 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AL596245.1-201ENST00000618994 362 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC002550.2-201ENST00000621246 394 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 AC018630.2-201ENST00000534866 2403 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 MTND5P11-201ENST00000511037 1812 ntBASIC0.48□□□□□ -2.33
TRAV1-2A0A0B4J238 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 Y_RNA.245-201ENST00000364493 95 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-968P-201ENST00000384076 107 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 SNORA29-201ENST00000384183 140 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 TPMTP3-201ENST00000411928 735 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 SRIP3-201ENST00000413200 219 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 MTCO3P5-201ENST00000433620 714 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 RPS15AP9-201ENST00000439856 381 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC092001.1-201ENST00000453012 261 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AL441985.1-201ENST00000457727 251 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC008628.1-201ENST00000508663 265 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 ACA64.5-201ENST00000516207 127 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-586P-201ENST00000517265 104 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 RNU6-840P-201ENST00000517275 65 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AP000763.2-201ENST00000540641 163 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 LINC00557-201ENST00000563184 1279 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 CYP3A52P-201ENST00000563326 91 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC233266.2-201ENST00000567067 528 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC136932.1-201ENST00000574771 208 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC010133.1-201ENST00000615809 842 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC009032.1-201ENST00000617574 431 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 AC027335.2-201ENST00000624030 375 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 U6.101-201ENST00000637707 76 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 MTCO1P9-201ENST00000505577 1534 ntBASIC0.47□□□□□ -2.33
TRAV1-2A0A0B4J238 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 MIR508-201ENST00000384857 115 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 MIR1267-201ENST00000408723 78 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU2-68P-201ENST00000410878 191 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC092634.6-201ENST00000418558 192 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC010153.1-201ENST00000432862 727 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 RPL31P3-201ENST00000458430 332 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 RPL26P26-201ENST00000480251 434 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6-760P-201ENST00000516078 97 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU5B-3P-201ENST00000516601 115 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC004812.1-201ENST00000540773 146 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC021171.1-201ENST00000603137 706 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AP000942.3-201ENST00000603702 160 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AL355598.1-201ENST00000604169 202 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC011451.2-201ENST00000604303 598 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AP000860.1-201ENST00000605250 559 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AL583856.2-201ENST00000606298 543 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC025754.2-201ENST00000606491 432 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AC084824.5-201ENST00000612009 413 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 AL133216.2-202ENST00000634512 349 ntBASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
TRAV1-2A0A0B4J238 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 NACAP2-201ENST00000318548 624 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6-658P-201ENST00000384606 106 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU2-28P-201ENST00000410457 189 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AC009518.2-201ENST00000418056 731 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 POLR2J4-204ENST00000418424 324 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 EIF1P1-201ENST00000421436 341 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AL022400.1-201ENST00000423946 935 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AC008267.5-201ENST00000424928 265 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AC244505.5-201ENST00000443639 207 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 VN1R10P-201ENST00000447106 875 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AC013267.1-201ENST00000458227 267 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AL163540.1-201ENST00000485382 386 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AC108729.1-201ENST00000487812 947 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 ACA59.2-201ENST00000517061 156 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 MRPS36P5-201ENST00000551909 298 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 NIFKP8-201ENST00000560500 874 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms