Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RNU6-443P-201ENST00000384780 107 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR512-1-201ENST00000384913 84 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AL139039.1-201ENST00000401900 692 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 MTND1P29-201ENST00000448112 647 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC079448.1-201ENST00000449377 373 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 snoU13.26-201ENST00000459452 105 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC080013.2-201ENST00000460866 323 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 KLF3P2-201ENST00000465138 268 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AP000852.1-201ENST00000472460 573 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC090096.1-201ENST00000489168 390 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC116562.3-201ENST00000506136 177 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC023141.11-201ENST00000508864 202 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 RNA5SP112-201ENST00000515937 99 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-410P-201ENST00000517006 107 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-1315P-201ENST00000517187 99 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU1-104P-201ENST00000517280 175 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC009902.1-201ENST00000519351 183 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC068587.5-201ENST00000528506 175 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 ADI1P3-201ENST00000549509 470 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC023824.2-201ENST00000566185 400 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR4446-201ENST00000578505 67 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR4765-201ENST00000585007 77 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC007938.3-201ENST00000604965 623 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC098614.4-201ENST00000607601 462 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC009090.3-201ENST00000616553 565 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC010338.1-201ENST00000621823 717 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC138649.3-201ENST00000622154 254 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC025034.2-201ENST00000623264 286 ntBASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PCDHGA1Q9Y5H4 AC080128.1-201ENST00000474389 1917 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR26A1-201ENST00000362205 77 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 Y_RNA.51-201ENST00000362725 102 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 SNORA38-201ENST00000363946 132 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-282P-201ENST00000365357 103 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-61P-201ENST00000365528 109 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-74P-201ENST00000384235 107 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AC133104.1-201ENST00000429100 218 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 MTCO3P5-201ENST00000433620 714 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 FDX1P2-201ENST00000450769 375 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 MTCO2P18-201ENST00000457151 658 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AP004217.1-201ENST00000480579 346 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AC008549.1-201ENST00000512900 643 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 RNA5SP282-201ENST00000516355 108 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-430P-201ENST00000517078 107 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 BTF3P12-201ENST00000519620 469 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AC097065.2-201ENST00000608159 533 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AC012409.4-201ENST00000612923 249 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR6134-201ENST00000617606 109 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR7843-201ENST00000622274 79 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AC093648.1-201ENST00000623546 606 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.62□□□□□ -1.99
PCDHGA1Q9Y5H4 AL359854.1-201ENST00000614203 1594 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 MTND5P17-201ENST00000418405 1603 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 AC093536.2-201ENST00000565257 1406 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-486P-201ENST00000363116 107 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 U8.2-201ENST00000363156 134 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-181P-201ENST00000363225 107 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-1280P-201ENST00000365211 107 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 Y_RNA.359-201ENST00000365498 102 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 RNU6-395P-201ENST00000365662 106 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 MIR181B1-201ENST00000385240 110 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 DEFB108C-201ENST00000400154 252 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 U6atac.2-201ENST00000408644 118 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 TOMM20P4-201ENST00000427861 435 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 MTND4P32-201ENST00000437189 1237 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 FABP5P14-201ENST00000437273 393 ntBASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHGA1Q9Y5H4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms