Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 MIR4424-201ENST00000585257 86 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC025165.5-201ENST00000602802 578 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC080078.2-201ENST00000603766 501 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 MIR1321-201ENST00000637766 79 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 MIR7515-201ENST00000637837 67 ntBASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHGB3Q9Y5G1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 Y_RNA.402-201ENST00000383972 102 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 Y_RNA.573-201ENST00000384763 105 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RPL21P75-201ENST00000396599 483 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RPL21P28-201ENST00000401418 483 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 CIR1P3-201ENST00000405137 479 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU2-25P-201ENST00000411041 191 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 OR9R1P-201ENST00000412200 877 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AC016831.2-201ENST00000417179 352 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RPS15AP7-201ENST00000439294 405 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RPS3AP12-201ENST00000443616 753 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RPL21P39-201ENST00000463605 483 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RPL21P93-201ENST00000480465 489 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AC087190.1-201ENST00000484462 480 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 MRPL42P6-201ENST00000486397 371 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AC093591.1-201ENST00000491435 481 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RPL21P16-201ENST00000495531 483 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 RNA5SP112-201ENST00000515937 99 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 SCARNA17.1-201ENST00000516211 143 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 SCARNA17.2-201ENST00000516334 143 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 SNORA70.18-201ENST00000516696 98 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AC109479.2-201ENST00000517842 174 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AC068657.1-201ENST00000520807 306 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 AF250324.2-201ENST00000608299 610 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 SCARNA17.4-201ENST00000614296 143 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 YWHAEP7-203ENST00000622054 312 ntBASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGB3Q9Y5G1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU6-486P-201ENST00000363116 107 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 RNA5SP267-201ENST00000364893 126 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 Y_RNA.324-201ENST00000365165 102 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 U3.19-201ENST00000390893 196 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 SNORA16.2-201ENST00000390991 127 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU6-648P-201ENST00000410190 107 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 CYCSP33-201ENST00000414485 327 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC093151.1-201ENST00000427711 313 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC009296.1-201ENST00000443146 155 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 MTCO3P38-201ENST00000468910 766 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 MED28P2-201ENST00000475771 317 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 RPL38P4-201ENST00000502376 214 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 MTCO3P9-201ENST00000506989 781 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC103810.1-201ENST00000579873 453 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC012493.2-201ENST00000595083 291 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 DISC2.1-201ENST00000612827 205 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC010338.1-201ENST00000621823 717 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC244517.12-201ENST00000623581 663 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 Z69720.2-201ENST00000624755 279 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AP003400.5-201ENST00000624827 617 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 AC068137.3-201ENST00000639191 341 ntBASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PCDHGB3Q9Y5G1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU6-942P-201ENST00000363002 107 ntBASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 RNU6-843P-201ENST00000384454 104 ntBASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 RPS4XP7-201ENST00000406274 780 ntBASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 FTH1P15-201ENST00000406984 280 ntBASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 DBIP2-201ENST00000419076 262 ntBASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGB3Q9Y5G1 Y_RNA.687-201ENST00000516558 91 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms