Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC007363.1-201ENST00000604736 620 ntBASIC1.2□□□□□ -2.22
HHLA3Q9XRX5 AL355472.4-201ENST00000610233 626 ntBASIC1.2□□□□□ -2.22
HHLA3Q9XRX5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.2□□□□□ -2.22
HHLA3Q9XRX5 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.2□□□□□ -2.22
HHLA3Q9XRX5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.2□□□□□ -2.22
HHLA3Q9XRX5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.2□□□□□ -2.22
HHLA3Q9XRX5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
HHLA3Q9XRX5 RNU6-288P-201ENST00000363690 104 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 SNORA26.9-201ENST00000391322 122 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 HSPE1P21-201ENST00000438283 308 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 NEFMP1-201ENST00000443423 1006 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AC104982.1-201ENST00000478775 574 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 RPS3AP22-201ENST00000488297 769 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 RNU6-970P-201ENST00000516312 107 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 RNU6-250P-201ENST00000516958 103 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 SNORA31.19-201ENST00000517079 126 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 RPS3AP4-201ENST00000555161 764 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 PSMA3P-201ENST00000555485 635 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 MIR4285-201ENST00000581001 85 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AL158827.2-201ENST00000602494 330 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 BNIP3P9-201ENST00000603714 553 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AL670379.10-201ENST00000604330 253 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AL670379.9-201ENST00000605428 253 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AC097468.3-201ENST00000607956 456 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 MIR6845-201ENST00000613182 61 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AL691447.3-201ENST00000635020 330 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AC106858.1-201ENST00000637497 429 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AC099654.8-201ENST00000637757 681 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 MTND5P10-201ENST00000603719 1809 ntBASIC1.19□□□□□ -2.22
HHLA3Q9XRX5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 RNU5A-8P-201ENST00000364102 114 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 SNORA8-201ENST00000384574 139 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 RNU6-278P-201ENST00000390945 109 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 FTH1P15-201ENST00000406984 280 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 FCF1P10-201ENST00000407590 479 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 MIR1261-201ENST00000408659 82 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 RN7SKP51-201ENST00000410781 304 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 RPS12P24-201ENST00000412619 387 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 VPS26BP1-201ENST00000417155 755 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC244636.1-201ENST00000421152 228 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC008267.5-201ENST00000424928 265 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 MTND4P25-201ENST00000441039 533 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC010095.1-201ENST00000443543 144 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 BTF3P15-201ENST00000455606 336 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 YWHAEP4-201ENST00000505390 198 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 MTND4P2-201ENST00000507767 1203 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC117522.2-201ENST00000510049 657 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 MTCYBP43-201ENST00000513621 740 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 RNU6-467P-201ENST00000517027 110 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AP000907.2-201ENST00000530827 353 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 ELOCP5-201ENST00000604924 333 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 BCRP9-201ENST00000605312 388 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 RNU6-91P-201ENST00000607774 107 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 MIR8081-201ENST00000611533 95 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC091834.1-201ENST00000614543 472 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC091953.2-201ENST00000623979 160 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 AC017037.3-201ENST00000625016 472 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 TEX21P-201ENST00000447107 1476 ntBASIC1.18□□□□□ -2.22
HHLA3Q9XRX5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 SNORA4.3-201ENST00000365564 137 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 Y_RNA.465-201ENST00000384293 102 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 RNU6-166P-201ENST00000384371 107 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 Y_RNA.534-201ENST00000384599 112 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 RNU6-817P-201ENST00000391083 104 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 SNORA40C-201ENST00000391285 128 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 MIR934-201ENST00000401241 83 ntBASIC1.17□□□□□ -2.22
HHLA3Q9XRX5 AL033519.2-201ENST00000403958 392 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms