Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRPF3Q9ULD4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.9□□□□□ -1.63
BRPF3Q9ULD4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
BRPF3Q9ULD4 AL359693.1-201ENST00000614959 2407 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 Y_RNA.476-201ENST00000384347 108 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 RNU6-166P-201ENST00000384371 107 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 MIR625-201ENST00000385047 85 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 MIR34A-201ENST00000385130 110 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 MIR1179-201ENST00000408703 91 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 RNU2-68P-201ENST00000410878 191 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 COX6B1P7-201ENST00000430845 235 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 RPL21P2-201ENST00000440049 481 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 AC009237.8-201ENST00000445492 379 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 AC105137.1-201ENST00000484355 562 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 RN7SL283P-201ENST00000489055 303 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 RNU6-572P-201ENST00000516724 80 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 Y_RNA.715-201ENST00000517082 110 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 AC040926.1-201ENST00000530195 238 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 AC022655.2-201ENST00000577280 318 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 MIR4284-201ENST00000578924 81 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 AC053481.4-201ENST00000583164 216 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 ARF4P1-201ENST00000605447 541 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 HMGB1P24-202ENST00000615653 685 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 MTND5P27-201ENST00000428871 1720 ntBASIC4.89□□□□□ -1.63
BRPF3Q9ULD4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 ZNF299P-201ENST00000406845 1804 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 U3.42-201ENST00000408746 214 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 EIF4EP2-201ENST00000422816 654 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AC092798.1-201ENST00000458542 409 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 RN7SL330P-201ENST00000469709 307 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 UQCRHP4-201ENST00000471686 272 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 RPL22P13-201ENST00000493291 347 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AC109479.2-201ENST00000517842 174 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AP005902.1-201ENST00000521358 186 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AC004584.2-201ENST00000570407 410 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AC006600.1-201ENST00000572529 153 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AC004805.2-201ENST00000605382 482 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 MIR1244-1-201ENST00000612829 85 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 U2.1-201ENST00000618978 145 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 MIR1244-3-201ENST00000635744 85 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 MIR1244-2-201ENST00000636449 85 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 MIR1244-4-202ENST00000636813 85 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AF117829.1-206ENST00000621883 3802 ntBASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRPF3Q9ULD4 AC007785.2-201ENST00000598627 1916 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 MIR383-201ENST00000362257 73 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 SNORA63.7-201ENST00000365579 123 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AC006011.1-201ENST00000442758 349 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AL078601.1-201ENST00000444542 271 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 OSTCP8-201ENST00000445117 448 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 RNA5SP246-201ENST00000458909 119 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 RNU7-169P-201ENST00000459456 61 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AC093852.1-201ENST00000503587 266 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AK3P2-201ENST00000507976 429 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 Y_RNA.668-201ENST00000516233 93 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 RNU6-1231P-201ENST00000517185 103 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AC144568.1-201ENST00000520139 137 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AP003730.1-201ENST00000524605 285 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AC023575.1-201ENST00000580510 358 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 MIR3939-201ENST00000582614 106 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 MIR8076-201ENST00000611401 83 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 MIR378J-201ENST00000611988 109 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 AC107871.2-201ENST00000612894 502 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 MIR7151-201ENST00000617477 60 ntBASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
BRPF3Q9ULD4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
BRPF3Q9ULD4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms