Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 Y_RNA.451-201ENST00000384200 100 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 Y_RNA.524-201ENST00000384564 100 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 Y_RNA.561-201ENST00000384694 100 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 MIR190B-201ENST00000401119 79 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 MIR1911-201ENST00000410783 80 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 MTCO3P19-201ENST00000415864 321 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 RPL23AP95-201ENST00000426806 265 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 RPS12P10-201ENST00000427031 377 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 SSXP4-201ENST00000451349 245 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 AC034236.1-201ENST00000469891 373 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 SLC25A15P5-201ENST00000508033 253 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 AC017037.1-201ENST00000508460 471 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 RNU7-175P-201ENST00000515915 61 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 AL161670.1-201ENST00000554348 137 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 RPL23AP78-201ENST00000599928 470 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 AC010205.1-201ENST00000616668 449 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 U4.1-201ENST00000620349 87 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 MIR7703-201ENST00000620784 77 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 SCARNA4-201ENST00000629045 128 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 MIR3529-201ENST00000637713 78 ntBASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.31□□□□□ -1.72
VTI1BQ9UEU0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 HAUS6P2-201ENST00000433254 2404 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 RNU1-140P-201ENST00000365040 165 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 Y_RNA.401-201ENST00000383965 117 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 RNU6-398P-201ENST00000384143 109 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 RNU6-198P-201ENST00000384258 104 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 RPL23AP93-201ENST00000440847 484 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 RPS3AP12-201ENST00000443616 753 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 RN7SL354P-201ENST00000469282 294 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 RPS26P21-201ENST00000475397 348 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 Y_RNA.706-201ENST00000516933 99 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 ACA59.2-201ENST00000517061 156 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 MIR4700-201ENST00000578311 74 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 AC243829.7-201ENST00000633081 225 ntBASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.3□□□□□ -1.72
VTI1BQ9UEU0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 RNU6-26P-201ENST00000383985 107 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 RNU6-843P-201ENST00000384454 104 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 RNU6-1109P-201ENST00000391187 107 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 AL161651.1-201ENST00000440882 223 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 RNU7-23P-201ENST00000459465 62 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 RN7SL585P-201ENST00000470538 280 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 AC091874.1-201ENST00000511402 339 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 RN7SKP92-201ENST00000517266 244 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 AC091144.1-201ENST00000519573 138 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 CKS1BP7-201ENST00000522230 235 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 MRPS36P4-201ENST00000534436 298 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 TOMM20P2-201ENST00000540082 421 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 AL591034.3-201ENST00000605511 685 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 uc_338.32-201ENST00000615087 172 ntBASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
VTI1BQ9UEU0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 RNU6-238P-201ENST00000363313 106 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 Y_RNA.193-201ENST00000363979 102 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 Y_RNA.210-201ENST00000364161 110 ntBASIC4.28□□□□□ -1.72
VTI1BQ9UEU0 RNU4-50P-201ENST00000364361 141 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms