Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 RNFT1P2-201ENST00000443064 757 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC092001.1-201ENST00000453012 261 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 PRELID3BP1-201ENST00000457142 540 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC021382.1-201ENST00000483523 359 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AL133373.1-201ENST00000497098 94 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC109927.2-201ENST00000506416 303 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC008628.1-201ENST00000508663 265 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 RNU6-586P-201ENST00000517265 104 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AP000763.2-201ENST00000540641 163 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC073544.2-201ENST00000601155 540 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AL390208.1-201ENST00000605885 644 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 RNU6-91P-201ENST00000607774 107 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 MIR6078-201ENST00000611069 100 ntBASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.78□□□□□ -2.28
COMMD3Q9UBI1 AC092125.1-201ENST00000562568 1995 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 HAUS6P2-201ENST00000433254 2404 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 MIR302D-201ENST00000362275 68 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 RNU6-353P-201ENST00000364266 108 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 RNU6-1078P-201ENST00000364522 103 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 RNU6-549P-201ENST00000384433 107 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 MIR764-201ENST00000390811 85 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 SNORA17.3-201ENST00000391159 129 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 MTCO2P5-201ENST00000422621 426 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 RPS27P16-201ENST00000425758 201 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 CST2P1-201ENST00000425770 87 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 RPS6P15-201ENST00000431996 751 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 HMGN2P18-201ENST00000450680 270 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 FDX1P2-201ENST00000450769 375 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 MTND1P9-201ENST00000453775 944 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 snoU13.23-201ENST00000458863 104 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 TMEM251P1-201ENST00000503717 318 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 PTP4A1P4-201ENST00000512479 322 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 RNU6-581P-201ENST00000516214 105 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 RNU6-678P-201ENST00000516832 109 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 AC022861.1-201ENST00000522981 663 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 AL139344.1-201ENST00000605228 195 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 AL353997.5-201ENST00000618886 171 ntBASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
COMMD3Q9UBI1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 RNU6-932P-201ENST00000391108 106 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 SNORA11.2-201ENST00000408318 127 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 RPS12P24-201ENST00000412619 387 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 SRIP3-201ENST00000413200 219 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 USP9YP22-201ENST00000438971 294 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 FABP5P15-201ENST00000453566 214 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 ACA59.2-201ENST00000517061 156 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 AC090115.3-201ENST00000553218 849 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 AC079148.1-201ENST00000565944 819 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 RN7SL622P-201ENST00000585292 275 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 WISP1-OT1-201ENST00000602893 642 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 MIR1322-201ENST00000638013 71 ntBASIC0.76□□□□□ -2.29
COMMD3Q9UBI1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 NACAP2-201ENST00000318548 624 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 RNU6-28P-201ENST00000362378 107 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 RNU6-1167P-201ENST00000363227 94 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 RNU6-754P-201ENST00000391166 107 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AL590084.2-201ENST00000401481 382 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 DHFRP6-201ENST00000401776 268 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 BTF3P4-201ENST00000418852 495 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 NCOR1P3-201ENST00000420479 303 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 USP9YP26-201ENST00000421008 661 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AL139421.1-201ENST00000423010 169 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AC139712.2-201ENST00000424302 339 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 USP9YP18-201ENST00000425912 695 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 USP9YP17-201ENST00000444617 696 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 PRPS1P1-201ENST00000445305 876 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 RPL7P43-201ENST00000478876 753 ntBASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.75□□□□□ -2.29
COMMD3Q9UBI1 AC103851.1-201ENST00000506833 274 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms