Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.65□□□□□ -1.67
CNTN3Q9P232 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.65□□□□□ -1.67
CNTN3Q9P232 AC240442.1-201ENST00000616055 283 ntBASIC4.65□□□□□ -1.67
CNTN3Q9P232 MIR8059-201ENST00000620427 81 ntBASIC4.65□□□□□ -1.67
CNTN3Q9P232 AC099506.2-201ENST00000623074 221 ntBASIC4.65□□□□□ -1.67
CNTN3Q9P232 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.65□□□□□ -1.67
CNTN3Q9P232 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CNTN3Q9P232 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.65□□□□□ -1.67
CNTN3Q9P232 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNTN3Q9P232 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNTN3Q9P232 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNTN3Q9P232 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
CNTN3Q9P232 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
CNTN3Q9P232 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNTN3Q9P232 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNTN3Q9P232 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNTN3Q9P232 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 RNU1-108P-201ENST00000362556 161 ntBASIC4.64□□□□□ -1.67
CNTN3Q9P232 SNORD78.2-201ENST00000391076 69 ntBASIC4.64□□□□□ -1.67
CNTN3Q9P232 MIR1911-201ENST00000410783 80 ntBASIC4.64□□□□□ -1.67
CNTN3Q9P232 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 RPL23AP81-201ENST00000455252 467 ntBASIC4.64□□□□□ -1.67
CNTN3Q9P232 KC877373.1-201ENST00000479066 408 ntBASIC4.64□□□□□ -1.67
CNTN3Q9P232 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 RNU6-1012P-201ENST00000516606 109 ntBASIC4.64□□□□□ -1.67
CNTN3Q9P232 SNORA31.18-201ENST00000517043 134 ntBASIC4.64□□□□□ -1.67
CNTN3Q9P232 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.64□□□□□ -1.67
CNTN3Q9P232 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNTN3Q9P232 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 AC092435.4-201ENST00000623012 4159 ntBASIC4.64□□□□□ -1.67
CNTN3Q9P232 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CNTN3Q9P232 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNTN3Q9P232 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNTN3Q9P232 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNTN3Q9P232 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNTN3Q9P232 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNTN3Q9P232 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNTN3Q9P232 RNU6-78P-201ENST00000362897 107 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 RNA5SP22-201ENST00000365393 109 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 RNU6-72P-201ENST00000384285 79 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 RNU6-886P-201ENST00000384319 105 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 RPL7AP28-201ENST00000464513 571 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 RN7SKP21-201ENST00000516503 220 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 RNA5SP468-201ENST00000516782 93 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 AC053481.4-201ENST00000583164 216 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 AC007785.2-201ENST00000598627 1916 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNTN3Q9P232 AC008568.2-201ENST00000623862 2313 ntBASIC4.63□□□□□ -1.67
CNTN3Q9P232 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNTN3Q9P232 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.63□□□□□ -1.67
CNTN3Q9P232 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CNTN3Q9P232 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.62□□□□□ -1.67
CNTN3Q9P232 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CNTN3Q9P232 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CNTN3Q9P232 AC233981.2-201ENST00000611524 1614 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNTN3Q9P232 Y_RNA.150-201ENST00000363562 102 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 Y_RNA.269-201ENST00000364685 89 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 RPS26P8-201ENST00000393490 348 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 AL079342.1-201ENST00000401460 267 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 CRYBB2P1-203ENST00000415709 538 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 AP000907.1-201ENST00000428428 510 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.62□□□□□ -1.67
CNTN3Q9P232 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.62□□□□□ -1.67
CNTN3Q9P232 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.62□□□□□ -1.67
CNTN3Q9P232 SNORA70.16-201ENST00000516390 95 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 SNORA31.9-201ENST00000516429 84 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 IGLV3-26-201ENST00000520756 302 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.62□□□□□ -1.67
CNTN3Q9P232 TOMM20P2-201ENST00000540082 421 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 AC006064.5-201ENST00000541782 248 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 TVP23BP1-201ENST00000557500 617 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 MTND6P33-201ENST00000571794 183 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 AC091903.1-201ENST00000624322 454 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 MIR492-201ENST00000638676 116 ntBASIC4.62□□□□□ -1.67
CNTN3Q9P232 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.62□□□□□ -1.67
CNTN3Q9P232 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CNTN3Q9P232 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.62□□□□□ -1.67
CNTN3Q9P232 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms