Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SNORA40.4-201ENST00000390971 128 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 NDUFS5P1-201ENST00000405668 289 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 TPMTP3-201ENST00000411928 735 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AL449283.1-202ENST00000418249 604 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 BX119904.4-201ENST00000424402 301 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC244035.1-201ENST00000430042 390 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 NDUFA5P4-201ENST00000436704 385 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AP000949.1-201ENST00000438328 629 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AL161788.1-201ENST00000441805 169 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 RPL23AP3-201ENST00000453844 468 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC112771.1-201ENST00000463581 102 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 HMGB1P36-201ENST00000487709 576 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 RPF2P2-201ENST00000504693 896 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 RNU6-583P-201ENST00000516012 92 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 SNORA31.6-201ENST00000516241 130 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 MIR3198-2-201ENST00000577868 80 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 MIR4452-201ENST00000583004 71 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 UBE2L4-201ENST00000587688 464 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC098848.2-201ENST00000588023 330 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AL121895.2-201ENST00000619558 447 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 MIR6767-201ENST00000637302 66 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AL390862.1-201ENST00000635467 1469 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 MIR320C1-201ENST00000408566 88 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 COX7BP2-201ENST00000437976 242 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 RPL37P6-201ENST00000460682 294 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 FO393415.2-201ENST00000480085 343 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC113347.3-201ENST00000509113 148 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AP005639.2-201ENST00000527592 928 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AL121821.2-201ENST00000556081 394 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC012435.1-202ENST00000568772 240 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AC103810.9-201ENST00000606688 112 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 RNU6-91P-201ENST00000607774 107 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 AL589743.7-201ENST00000612637 233 ntBASIC1.22□□□□□ -2.21
CCDC88CQ9P219 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.21
CCDC88CQ9P219 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC88CQ9P219 Y_RNA.238-201ENST00000364441 102 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 RNU6-1280P-201ENST00000365211 107 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 MIR518E-201ENST00000385252 88 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 Y_RNA.578-201ENST00000390903 88 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AL356432.1-201ENST00000405809 419 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 USP9YP6-201ENST00000413550 854 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC88CQ9P219 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC88CQ9P219 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC88CQ9P219 SUMO2P5-201ENST00000506790 245 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AC005261.5-201ENST00000596280 355 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 WISP1-OT1-201ENST00000602893 642 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AL138963.2-201ENST00000605137 226 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AC006270.3-201ENST00000605967 1036 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AC024060.1-201ENST00000607052 494 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AL603758.1-201ENST00000618654 241 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 AC004808.1-201ENST00000627671 721 ntBASIC1.21□□□□□ -2.22
CCDC88CQ9P219 Z75746.1-201ENST00000440243 2080 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 MIR337-201ENST00000362281 93 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 RNU1-62P-201ENST00000362599 164 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 RNU6-97P-201ENST00000363387 104 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 RNU6-288P-201ENST00000363690 104 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 MIR95-201ENST00000385072 81 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 MIR676-201ENST00000390702 67 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 RNU6-278P-201ENST00000390945 109 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AL359704.1-201ENST00000411586 781 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 GPM6BP2-201ENST00000432046 144 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AL591704.1-201ENST00000432574 275 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC005094.1-201ENST00000440420 368 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 GPM6BP1-201ENST00000446387 144 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 EEF1E1P1-201ENST00000446998 430 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 RPL12P25-201ENST00000455592 494 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC087884.1-201ENST00000469738 328 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC104563.1-201ENST00000476147 376 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 RPS27AP10-201ENST00000496103 208 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 SNORA31.24-201ENST00000517232 57 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.2□□□□□ -2.22
CCDC88CQ9P219 ROCK1P1-201ENST00000573767 549 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 VN1R83P-201ENST00000595685 445 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 AL450336.1-201ENST00000605180 586 ntBASIC1.2□□□□□ -2.22
CCDC88CQ9P219 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms