Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC112220.3-201ENST00000605502 502 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AC103710.2-201ENST00000609912 942 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AC110994.2-201ENST00000635481 492 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 AC010149.2-201ENST00000637608 315 ntBASIC1.59□□□□□ -2.15
VAPAQ9P0L0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 SNORA4.3-201ENST00000365564 137 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 SNORA40C-201ENST00000391285 128 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 RNU6-1025P-201ENST00000410629 104 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC008267.5-201ENST00000424928 265 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 TIMM9P1-201ENST00000436122 256 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 LARP1BP3-201ENST00000437229 869 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 RPL7P54-201ENST00000438336 674 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC006512.1-201ENST00000468816 291 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 BZW1P2-201ENST00000473537 826 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 RPL7P18-201ENST00000478965 734 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 CYCSP27-201ENST00000527643 293 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC013828.2-201ENST00000532487 235 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC136619.2-201ENST00000563361 631 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 BCRP9-201ENST00000605312 388 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC093788.1-201ENST00000609356 927 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 AC068944.2-201ENST00000610373 403 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 MIR6852-201ENST00000621699 66 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 SCARNA15.3-201ENST00000626315 122 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 SCARNA4.1-201ENST00000628597 123 ntBASIC1.58□□□□□ -2.16
VAPAQ9P0L0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VAPAQ9P0L0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VAPAQ9P0L0 RNU6-166P-201ENST00000384371 107 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 RNU6-769P-201ENST00000384407 104 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 RNU1-57P-201ENST00000384491 166 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 SNORA8-201ENST00000384574 139 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 RNU4-22P-201ENST00000411058 166 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AL591212.2-201ENST00000433923 257 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.57□□□□□ -2.16
VAPAQ9P0L0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.57□□□□□ -2.16
VAPAQ9P0L0 RNU6-1315P-201ENST00000517187 99 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC022880.1-201ENST00000534017 973 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC093249.1-201ENST00000567049 203 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC025678.1-201ENST00000567861 338 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC010928.2-201ENST00000588017 287 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC073410.2-201ENST00000603240 332 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AL670379.6-201ENST00000603753 252 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AL670379.11-201ENST00000604059 253 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC008162.1-201ENST00000604718 254 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AL670379.1-201ENST00000604752 252 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AL670379.5-201ENST00000605253 252 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AL670379.12-201ENST00000605291 253 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AL670379.8-201ENST00000605353 252 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AL670379.7-201ENST00000605823 252 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC091965.4-201ENST00000607691 587 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 AC091965.5-201ENST00000624785 342 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 MTND5P42-201ENST00000637720 498 ntBASIC1.57□□□□□ -2.16
VAPAQ9P0L0 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 RNU5E-10P-201ENST00000363506 118 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 Y_RNA.534-201ENST00000384599 112 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 RNU6-997P-201ENST00000384725 107 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 RNU6-1140P-201ENST00000410517 106 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 ELOCP17-201ENST00000414751 326 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 ELOCP9-201ENST00000418624 239 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC093899.1-201ENST00000457984 376 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AL139824.2-201ENST00000458731 1095 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC087884.1-201ENST00000469738 328 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC135279.1-201ENST00000543493 504 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 MIR4435-1-201ENST00000582552 80 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 BNIP3P25-201ENST00000596023 559 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC021646.1-201ENST00000605469 484 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC080013.3-201ENST00000606839 578 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC022893.3-201ENST00000607665 437 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 AC130324.3-201ENST00000614165 542 ntBASIC1.56□□□□□ -2.16
VAPAQ9P0L0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.56□□□□□ -2.16
VAPAQ9P0L0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms