Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 Y_RNA.481-201ENST00000384373 102 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 RNU6-550P-201ENST00000391057 101 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 SNORA48.5-201ENST00000391143 135 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 RNU6-903P-201ENST00000391270 109 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 CALM2P2-201ENST00000428512 440 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 CR769767.1-201ENST00000436337 346 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 CECR9-201ENST00000453421 199 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC087588.1-201ENST00000462203 316 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 GMFBP1-201ENST00000467831 427 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AL163973.1-201ENST00000484753 577 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC069439.1-201ENST00000494739 167 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 RPL30P5-201ENST00000494923 336 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC098591.2-201ENST00000510152 315 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 RAC1P5-201ENST00000512182 576 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC008885.1-201ENST00000514930 301 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 RNU6-914P-201ENST00000516749 109 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 RANP3-201ENST00000530970 276 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 H3F3AP1-201ENST00000559984 334 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AL162413.1-201ENST00000603198 110 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC009570.1-201ENST00000609599 745 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 MIR7975-201ENST00000619350 68 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AC027309.3-201ENST00000623419 351 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AL512643.1-201ENST00000635735 524 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 Z99571.1-201ENST00000636677 394 ntBASIC2.59□□□□□ -1.99
NDE1Q9NXR1 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.59□□□□□ -1.99
NDE1Q9NXR1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.59□□□□□ -2
NDE1Q9NXR1 AC099654.7-201ENST00000635788 2127 ntBASIC2.59□□□□□ -2
NDE1Q9NXR1 AC103710.2-202ENST00000641454 2853 ntBASIC2.59□□□□□ -2
NDE1Q9NXR1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -2
NDE1Q9NXR1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NDE1Q9NXR1 AL365361.1-201ENST00000566942 3481 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
NDE1Q9NXR1 Y_RNA.245-201ENST00000364493 95 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 RNU6-534P-201ENST00000364877 106 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 SNORD37.1-201ENST00000390968 65 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 MIR1277-201ENST00000408536 78 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.58□□□□□ -2
NDE1Q9NXR1 RNU2-25P-201ENST00000411041 191 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.58□□□□□ -2
NDE1Q9NXR1 TMEM167AP1-201ENST00000423409 219 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC000111.3-201ENST00000433478 193 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 Z82210.1-201ENST00000440037 231 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 RPS24P13-201ENST00000442520 397 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.58□□□□□ -2
NDE1Q9NXR1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.58□□□□□ -2
NDE1Q9NXR1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.58□□□□□ -2
NDE1Q9NXR1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.58□□□□□ -2
NDE1Q9NXR1 RPL37P6-201ENST00000460682 294 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AL160314.1-201ENST00000490836 438 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.58□□□□□ -2
NDE1Q9NXR1 MTCO3P9-201ENST00000506989 781 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.58□□□□□ -2
NDE1Q9NXR1 RNU6-928P-201ENST00000516876 104 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 RN7SKP40-201ENST00000517211 242 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.58□□□□□ -2
NDE1Q9NXR1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.58□□□□□ -2
NDE1Q9NXR1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.58□□□□□ -2
NDE1Q9NXR1 HIF1AP1-201ENST00000553642 175 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AL133241.1-201ENST00000556832 487 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.58□□□□□ -2
NDE1Q9NXR1 MIR5004-201ENST00000579078 107 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC011471.1-201ENST00000585766 187 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.58□□□□□ -2
NDE1Q9NXR1 AC005000.2-201ENST00000605468 310 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AL137847.3-201ENST00000611521 109 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC024940.5-201ENST00000622889 474 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.58□□□□□ -2
NDE1Q9NXR1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
NDE1Q9NXR1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.58□□□□□ -2
NDE1Q9NXR1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
NDE1Q9NXR1 HSPA8P4-201ENST00000511877 1920 ntBASIC2.58□□□□□ -2
NDE1Q9NXR1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.57□□□□□ -2
NDE1Q9NXR1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.57□□□□□ -2
NDE1Q9NXR1 RNU6-1283P-201ENST00000365314 105 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 SNORA4.3-201ENST00000365564 137 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 Y_RNA.534-201ENST00000384599 112 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 FAT1P1-201ENST00000406588 507 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 USP9YP6-201ENST00000413550 854 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 OR6C66P-201ENST00000414917 930 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 MTND1P2-201ENST00000430604 821 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AC022018.1-201ENST00000430685 241 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AL159987.2-201ENST00000432754 307 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 SEPT14P3-201ENST00000439401 183 ntBASIC2.57□□□□□ -2
NDE1Q9NXR1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms