Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC093913.1-201ENST00000614178 329 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 AC233981.2-201ENST00000611524 1614 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 RNU6-31P-201ENST00000384388 108 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 MIR1262-201ENST00000408276 93 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 MIR1295A-201ENST00000408463 79 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 RNU2-7P-201ENST00000410794 178 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 AC010631.1-201ENST00000474150 156 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 RPL26P26-201ENST00000480251 434 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 AL512605.2-201ENST00000592972 256 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 BNIP3P23-201ENST00000599655 511 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 AC090970.3-201ENST00000612566 866 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 GDI2P1-201ENST00000429312 1336 ntBASIC0.03□□□□□ -2.4
SMCO4Q9NRQ5 Z75746.1-201ENST00000440243 2080 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 RNU6-1164P-201ENST00000364428 107 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 RNU1-119P-201ENST00000391122 165 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 MIR1303-201ENST00000408625 86 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC233982.1-201ENST00000451247 436 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 OR2AQ1P-201ENST00000451972 200 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC104073.1-201ENST00000451988 151 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC098869.1-201ENST00000481627 292 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC067942.3-201ENST00000512025 362 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 SNORA26.10-201ENST00000516427 141 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 RNU6-1256P-201ENST00000516539 103 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 SNORD19.2-201ENST00000516978 73 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 Z83818.1-201ENST00000603584 150 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC083806.3-201ENST00000614016 455 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AC110491.1-201ENST00000562191 2010 ntBASIC0.02□□□□□ -2.41
SMCO4Q9NRQ5 AL442644.1-201ENST00000454390 3105 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC023934.1-201ENST00000574529 2389 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 RNA5SP99-201ENST00000364020 114 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 RN7SKP284-201ENST00000411002 343 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 Z82205.1-201ENST00000428456 297 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 AL592045.1-201ENST00000429867 352 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 MEMO1P3-201ENST00000459811 302 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 RPL23AP94-201ENST00000512518 302 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 RNU6-496P-201ENST00000516145 99 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC044913.1-201ENST00000557200 430 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC136619.2-201ENST00000563361 631 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 FAM106DP-201ENST00000586416 501 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC069114.2-201ENST00000604699 304 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 Z82243.1-201ENST00000609432 473 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC018926.3-201ENST00000618841 406 ntBASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
SMCO4Q9NRQ5 MIR96-201ENST00000362288 78 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 RNU6-16P-201ENST00000384385 107 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 RPS15AP12-201ENST00000419498 388 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 MTCO3P5-201ENST00000433620 714 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 AP001324.2-201ENST00000461163 319 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 RPL7P43-201ENST00000478876 753 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 AC105313.1-201ENST00000509121 353 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0□□□□□ -2.41
SMCO4Q9NRQ5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0□□□□□ -2.41
SMCO4Q9NRQ5 ADAM3B-201ENST00000569937 840 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 FTX_3.1-201ENST00000610451 147 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 AL138726.1-201ENST00000614873 333 ntBASIC0□□□□□ -2.41
SMCO4Q9NRQ5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0□□□□□ -2.41
SMCO4Q9NRQ5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC-0□□□□□ -2.41
SMCO4Q9NRQ5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 AL391994.1-201ENST00000254724 282 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 RNU1-93P-201ENST00000364704 169 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 VN1R42P-201ENST00000424651 344 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 HSPE1P9-201ENST00000440046 311 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 RPL26P6-201ENST00000440913 438 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 TRMT112P2-201ENST00000512910 132 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 SCARNA15.2-201ENST00000516409 127 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 RN7SKP49-201ENST00000516675 260 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 RNA5SP102-201ENST00000516865 106 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 SNORA70.22-201ENST00000517160 124 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC025423.5-201ENST00000550230 219 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 MIR3199-2-201ENST00000636243 86 ntBASIC-0.01□□□□□ -2.41
SMCO4Q9NRQ5 AC090625.1-201ENST00000357130 210 ntBASIC-0.02□□□□□ -2.41
SMCO4Q9NRQ5 RNU5A-1-201ENST00000362698 116 ntBASIC-0.02□□□□□ -2.41
SMCO4Q9NRQ5 U3.9-201ENST00000363823 204 ntBASIC-0.02□□□□□ -2.41
SMCO4Q9NRQ5 MIR200A-201ENST00000384875 90 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms