Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.89□□□□□ -1.95
HINT3Q9NQE9 MAPK10-362ENST00000641864 4484 ntBASIC2.89□□□□□ -1.95
HINT3Q9NQE9 AC093831.2-201ENST00000624393 3427 ntBASIC2.89□□□□□ -1.95
HINT3Q9NQE9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HINT3Q9NQE9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HINT3Q9NQE9 Z83843.1-201ENST00000604070 3685 ntBASIC2.89□□□□□ -1.95
HINT3Q9NQE9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 MTND5P27-201ENST00000428871 1720 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 Y_RNA.100-201ENST00000363141 102 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 Y_RNA.160-201ENST00000363677 92 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 RNU6-266P-201ENST00000364225 107 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC245054.2-201ENST00000415639 319 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC009161.1-201ENST00000417306 376 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 MTND4LP11-201ENST00000422184 280 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC005300.1-201ENST00000428401 373 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC098831.1-201ENST00000440661 216 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC008155.2-201ENST00000464337 397 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC087884.1-201ENST00000469738 328 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC128713.1-201ENST00000471495 306 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AP000852.1-201ENST00000472460 573 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC092185.1-201ENST00000491371 97 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 MTCO2P30-201ENST00000503662 364 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC079140.5-201ENST00000507882 310 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC098799.2-201ENST00000509466 868 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC025465.4-201ENST00000513422 638 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 SNORA14.1-201ENST00000516113 141 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 LINC00933-203ENST00000559812 219 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 MIR4276-201ENST00000584832 70 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC004852.3-201ENST00000614131 326 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AL157817.1-201ENST00000614264 790 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 AC110491.1-201ENST00000562191 2010 ntBASIC2.88□□□□□ -1.95
HINT3Q9NQE9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HINT3Q9NQE9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 Y_RNA.324-201ENST00000365165 102 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 RNY3P14-201ENST00000384309 102 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 RNU1-101P-201ENST00000391171 127 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 SNORA48.8-201ENST00000391324 134 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 EIF4E2P1-201ENST00000393781 255 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 RNU6-1148P-201ENST00000410992 104 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AC138393.2-201ENST00000414742 246 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 PGBD4P6-201ENST00000421501 610 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 RPS12P18-201ENST00000442381 270 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 UQCRHP3-201ENST00000451503 251 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 snoU13.22-201ENST00000459428 104 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 FAM206BP-201ENST00000510179 541 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 SNORA20.3-201ENST00000516880 132 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 RNU6-1314P-201ENST00000517139 104 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 RNA5SP380-201ENST00000517190 98 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AC134698.4-201ENST00000523451 826 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 CYCSP27-201ENST00000527643 293 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 PSMA3P-201ENST00000555485 635 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AL451007.1-201ENST00000595491 289 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AC007179.3-201ENST00000604976 235 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 CTHRC1P1-201ENST00000605383 469 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AL136221.1-201ENST00000621449 509 ntBASIC2.87□□□□□ -1.95
HINT3Q9NQE9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HINT3Q9NQE9 AC110774.1-201ENST00000623567 2018 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HINT3Q9NQE9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
HINT3Q9NQE9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HINT3Q9NQE9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HINT3Q9NQE9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.86□□□□□ -1.95
HINT3Q9NQE9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HINT3Q9NQE9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
HINT3Q9NQE9 MIR208A-201ENST00000362287 71 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 Y_RNA.72-201ENST00000362894 103 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 Y_RNA.303-201ENST00000364998 94 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 RNU6-898P-201ENST00000365627 104 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 Y_RNA.530-201ENST00000384587 101 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 MIR34A-201ENST00000385130 110 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 AC023141.4-201ENST00000412031 328 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HINT3Q9NQE9 USP9YP20-201ENST00000419224 558 ntBASIC2.86□□□□□ -1.95
HINT3Q9NQE9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms