Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL353706.1-201ENST00000436728 494 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 EPS15P1-201ENST00000448836 336 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 ZNF114P1-201ENST00000453500 292 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 AC104435.1-201ENST00000483483 166 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 AC139453.3-201ENST00000493276 369 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 SNORA3.4-201ENST00000515969 96 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 SNORA31.3-201ENST00000516029 96 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 AP001004.1-201ENST00000582468 324 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 AP001981.2-201ENST00000603241 418 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 AC009233.1-201ENST00000616477 371 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 AC091953.2-201ENST00000623979 160 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 TEX21P-201ENST00000447107 1476 ntBASIC2.17□□□□□ -2.06
TM9SF3Q9HD45 AC008555.8-201ENST00000623602 2168 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AL445523.1-201ENST00000451184 1362 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC138393.1-203ENST00000327086 343 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 RNA5SP99-201ENST00000364020 114 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AL353621.1-201ENST00000418219 243 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 TIMM9P1-201ENST00000436122 256 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AL161788.1-201ENST00000441805 169 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 BRK1P2-201ENST00000442875 223 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC104058.1-201ENST00000448028 297 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC108059.3-201ENST00000456388 214 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 RNU7-125P-201ENST00000458760 62 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC116337.1-201ENST00000509680 687 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 RNU6-759P-201ENST00000516740 103 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 DEFB108A-201ENST00000530110 222 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AL356432.3-201ENST00000568952 465 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AP000860.1-201ENST00000605250 559 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC090970.3-201ENST00000612566 866 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC131159.1-201ENST00000621854 213 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 AC008993.2-201ENST00000631744 806 ntBASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TM9SF3Q9HD45 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 RNU6-1159P-201ENST00000362933 107 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 RNU5F-6P-201ENST00000362979 116 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 RNU5A-8P-201ENST00000364102 114 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 RNY4P16-201ENST00000364768 94 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 OR5H15-201ENST00000383696 930 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 RNU6-701P-201ENST00000384059 107 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 MIR561-201ENST00000385216 97 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AL512604.1-201ENST00000404812 257 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 NDUFS5P1-201ENST00000405668 289 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC118469.1-201ENST00000442943 488 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 FABP5P13-201ENST00000452144 328 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 PMCHL2-203ENST00000457791 237 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC090515.1-201ENST00000465295 476 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC116655.1-201ENST00000508324 901 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 SNORA25.11-201ENST00000515935 105 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 RNU6-1129P-201ENST00000515964 104 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 RNA5SP137-201ENST00000516833 135 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 ZNF519P3-201ENST00000557158 1032 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 LINC00933-203ENST00000559812 219 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 BNIP3P9-201ENST00000603714 553 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC104010.1-201ENST00000616889 150 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 MIR6134-201ENST00000617606 109 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC010378.1-201ENST00000619270 362 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC009831.4-201ENST00000620744 325 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC091932.3-201ENST00000624223 323 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AL160394.1-201ENST00000624765 724 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms