Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 DPPA3P1-201ENST00000448050 469 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC091133.4-201ENST00000511142 308 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 MRPS36P2-201ENST00000512569 299 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 SNORA31.19-201ENST00000517079 126 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AP000889.1-201ENST00000530968 660 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 GLYCAM1-201ENST00000546596 285 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC006199.1-201ENST00000548728 219 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC005498.1-201ENST00000592125 465 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC005261.5-201ENST00000596280 355 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AL049779.4-201ENST00000604500 156 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC007621.1-201ENST00000604544 437 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC011939.3-201ENST00000613686 466 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC024940.5-201ENST00000622889 474 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC009161.2-201ENST00000624626 138 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 U6.99-201ENST00000637524 83 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 HSPA8P4-201ENST00000511877 1920 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 MIR449A-201ENST00000362113 91 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 RNU6-371P-201ENST00000364283 108 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 RNU4-24P-201ENST00000364565 139 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 RNU6-1103P-201ENST00000384150 107 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 RNU6-166P-201ENST00000384371 107 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 EEF1A1P40-201ENST00000412883 573 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AL358075.3-201ENST00000426289 226 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 CALM2P2-201ENST00000428512 440 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC104389.3-201ENST00000445629 235 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 RPL23AP45-201ENST00000476406 468 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 TBCAP3-201ENST00000512475 312 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 RNU6-405P-201ENST00000516637 110 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC087683.1-201ENST00000591187 441 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC060766.3-201ENST00000591442 263 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 RPL23AP78-201ENST00000599928 470 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 DEFB131E-202ENST00000602581 683 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC073648.5-201ENST00000603502 305 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC025449.1-201ENST00000603896 529 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 Z99129.1-201ENST00000612510 255 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AL359740.1-201ENST00000624340 592 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AC010889.1-201ENST00000566193 2666 ntBASIC2.67□□□□□ -1.98
SNX25Q9H3E2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SNX25Q9H3E2 SNORA25.6-201ENST00000364121 118 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 SNORA62.1-201ENST00000364287 154 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 U3.12-201ENST00000364498 214 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 RNU6-395P-201ENST00000365662 106 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 MIR518D-201ENST00000385014 87 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 RNU2-25P-201ENST00000411041 191 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 RNU6-387P-201ENST00000411331 105 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 SUMO1P4-201ENST00000429430 302 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AC023194.1-201ENST00000493084 308 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 MTCO3P7-201ENST00000510008 774 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 OR5AL2P-201ENST00000532185 920 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AC009063.1-201ENST00000563342 702 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AL356575.1-201ENST00000603008 283 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 MIR6134-201ENST00000617606 109 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 AC243829.7-201ENST00000633081 225 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 IGHVIII-44-202ENST00000636235 289 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 MIR3199-2-201ENST00000636243 86 ntBASIC2.66□□□□□ -1.98
SNX25Q9H3E2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SNX25Q9H3E2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 266.3 ms