Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
CNTNAP3Q9BZ76 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 SRP72P2-201ENST00000344851 1979 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 RNU6-294P-201ENST00000364999 102 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 RNU1-13P-201ENST00000384499 162 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 AC073073.1-201ENST00000493920 463 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 AC108145.1-201ENST00000503770 153 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 RNU6-762P-201ENST00000517107 102 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 AC021269.2-201ENST00000532318 330 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 AC107918.3-201ENST00000533272 382 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 MIR3121-201ENST00000579680 77 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 AC114781.5-201ENST00000615297 108 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 MUC2-202ENST00000613187 4845 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.77□□□□□ -1.65
CNTNAP3Q9BZ76 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 AL022322.2-201ENST00000624072 20397 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 AC069528.2-201ENST00000624849 1991 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 CUL1P1-201ENST00000509510 2425 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 AC092681.1-201ENST00000297369 291 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 RNU6-235P-201ENST00000362644 107 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 RNU6-336P-201ENST00000364891 107 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 MIR200C-201ENST00000384980 68 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 BTF3L4P2-201ENST00000392798 346 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 CYCSP19-201ENST00000411715 316 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 LINC02210-201ENST00000444561 288 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 SNORD33.1-201ENST00000516213 88 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 SNX18P1Y-201ENST00000616231 511 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 AC048347.1-201ENST00000624621 427 ntBASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.76□□□□□ -1.65
CNTNAP3Q9BZ76 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AC116096.1-201ENST00000566804 2314 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AC004925.1-201ENST00000624256 2706 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 Y_RNA.35-201ENST00000362601 101 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 MIR1290-201ENST00000408735 78 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AC006461.1-201ENST00000412637 326 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AL627311.1-201ENST00000431514 115 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AL353705.4-201ENST00000449661 238 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 RPL23AP24-201ENST00000458203 385 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 BTF3L4P4-201ENST00000506381 449 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AC010265.1-201ENST00000513509 211 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 SCARNA15.2-201ENST00000516409 127 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 MIR3921-201ENST00000577308 85 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AC011471.1-201ENST00000585766 187 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AL670379.3-201ENST00000605040 251 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AC092628.2-201ENST00000622492 339 ntBASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CNTNAP3Q9BZ76 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms