Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC008121.1-201ENST00000603244 268 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AP000787.2-201ENST00000604432 568 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC245389.1-201ENST00000605141 529 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AL355365.1-201ENST00000616480 294 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 AC022149.2-201ENST00000621061 203 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 SCARNA4-202ENST00000625402 129 ntBASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM54Q9BYV2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-37P-201ENST00000362692 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-11P-201ENST00000364234 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-7-201ENST00000364784 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-8-201ENST00000365467 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 AP002088.1-201ENST00000382740 395 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-25P-201ENST00000383873 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-1-201ENST00000383898 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 Y_RNA.387-201ENST00000383918 102 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-48P-201ENST00000384161 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-36P-201ENST00000384172 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-4P-201ENST00000384205 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-5P-201ENST00000384238 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-3P-201ENST00000384314 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 Y_RNA.474-201ENST00000384341 102 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-16P-201ENST00000384385 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-15P-201ENST00000384534 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 Y_RNA.535-201ENST00000384612 99 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-2-201ENST00000384627 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-29P-201ENST00000384637 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-9-201ENST00000384776 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-33P-201ENST00000384793 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RPS3AP52-201ENST00000435639 297 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 HMGN2P20-201ENST00000437531 273 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 U3.44-201ENST00000458938 192 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RPS27AP10-201ENST00000496103 208 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 MTND5P5-201ENST00000503764 376 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 AC007991.1-201ENST00000522680 631 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 AP005597.4-201ENST00000526762 229 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 CYCSP39-201ENST00000565821 309 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 MTND4LP5-201ENST00000605152 292 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 AC123912.5-201ENST00000605470 343 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 RNU6-6P-201ENST00000606623 107 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 Z69720.2-201ENST00000624755 279 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 AC119674.1-207ENST00000641355 633 ntBASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TRIM54Q9BYV2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC007823.1-201ENST00000569932 1566 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 RNU1-75P-201ENST00000347264 129 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 Y_RNA.67-201ENST00000362870 100 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 Y_RNA.339-201ENST00000365325 102 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 RNU6-1329P-201ENST00000365664 107 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AL445529.1-201ENST00000398713 389 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 RN7SKP158-201ENST00000410453 326 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 CYCSP19-201ENST00000411715 316 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 RPL7P37-201ENST00000425095 738 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC010099.1-201ENST00000455434 375 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 RPS4XP2-201ENST00000458402 793 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC110768.1-201ENST00000509222 400 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC113155.1-201ENST00000511141 769 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 IGHV3-76-201ENST00000522465 295 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC104576.1-201ENST00000524225 88 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC026333.2-201ENST00000542164 106 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 POLR3GP2-201ENST00000588366 668 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AL670379.10-201ENST00000604330 253 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 ELOCP5-201ENST00000604924 333 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AL670379.9-201ENST00000605428 253 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AC010378.1-201ENST00000619270 362 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 AL161912.2-201ENST00000565707 3007 ntBASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM54Q9BYV2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms